| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10027821m |
| Family | GH2 |
| Protein Properties | Length: 833 Molecular Weight: 93343 Isoelectric Point: 6.32 |
| Chromosome | Chromosome/Scaffold: 8 Start: 14372264 End: 14380447 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 66 | 698 | 0 |
| LVGKLEMPRLWSAEQPNLYTLVVILKHASGPVVDCESCLVGIRQVSKAPKQLLVNGNPVVIRGVNRHEHHPRVGKTNIESCMVKDLVLMKQNNINAVRNS HYPQHPRWYELCDLFGLYMIDEANIETHGFNFSEHFKHPTMEPSWAAAMMDRVIGMVERDKNHASIICWSLGNEAGHGPNHSAAAGWIRGKDPSRLLHYE GGGSRTPSTDIVCPMYMRVWDIVMIAKDPTETRPLILCEYSHAMGNSNGNIHEYWEAIDSTFGLQGGFIWDWVDQGLLRELADGTKHWAYGGDFGDTPND LNFCLNGLLWPDRTPHPALHEVKYVYQAINVSLKKGTLKISNTNFFETTQGLEFSWVAHGDGYKLGFGIISLPLIKPHSNYEIELKSSPWYSQWNSCSAE EIFLTVTAKLMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTIQLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPT DNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRV GVEFHLEQSMDKIKFYGRGPFECYPDRKAAAHV | |||
| Full Sequence |
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| Protein Sequence Length: 833 Download |
| MVGVEIDCSP EISKDSILAN FVIEAGLYDT GNWYNCDGCI DLLSSKVANI QLNPSTASVE 60 FPGYTLVGKL EMPRLWSAEQ PNLYTLVVIL KHASGPVVDC ESCLVGIRQV SKAPKQLLVN 120 GNPVVIRGVN RHEHHPRVGK TNIESCMVKD LVLMKQNNIN AVRNSHYPQH PRWYELCDLF 180 GLYMIDEANI ETHGFNFSEH FKHPTMEPSW AAAMMDRVIG MVERDKNHAS IICWSLGNEA 240 GHGPNHSAAA GWIRGKDPSR LLHYEGGGSR TPSTDIVCPM YMRVWDIVMI AKDPTETRPL 300 ILCEYSHAMG NSNGNIHEYW EAIDSTFGLQ GGFIWDWVDQ GLLRELADGT KHWAYGGDFG 360 DTPNDLNFCL NGLLWPDRTP HPALHEVKYV YQAINVSLKK GTLKISNTNF FETTQGLEFS 420 WVAHGDGYKL GFGIISLPLI KPHSNYEIEL KSSPWYSQWN SCSAEEIFLT VTAKLMNSTR 480 WAEAGHVIST AQVQLPSKRE RLPHVIRTGD AIILQENLGN TIQLSHQNSW EIKFDIQTGA 540 VESWKVEGVS VMKRGIFPCF WRAPTDNDKG GGESSYYSRW RAAGIDSLVF LTKSCSIQNV 600 TDYFVKIRVV YDGTPRVDMS SLTKLEKAKA LFEIVIDYTI YGSGNVIVEC NFKPNTSDLP 660 PLPRVGVEFH LEQSMDKIKF YGRGPFECYP DRKAAAHVDV YEQIVGDMHV PYIVPGECAA 720 RADVRWVTFQ NKEGIGIYAS MYSSSPPMQL NASYYTTTEL DRATHNEQLV KEDKIEVHLD 780 HKHMGLGGDD SWTPCVHDKY LVPAVAYSFS IRLSPLTAAT SGYGIYKSQM QN* 840 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart01038 | Bgal_small_N | 9.0e-99 | 528 | 813 | 286 | + Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase. | ||
| COG3250 | LacZ | 9.0e-109 | 64 | 696 | 645 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| pfam02836 | Glyco_hydro_2_C | 3.0e-112 | 114 | 395 | 295 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 2.0e-179 | 8 | 819 | 826 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 0 | 73 | 815 | 765 | + beta-D-galactosidase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002266400.1 | 0 | 2 | 832 | 283 | 1114 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 2 | 832 | 283 | 1115 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 2 | 832 | 283 | 1110 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002303929.1 | 0 | 2 | 832 | 283 | 1113 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 2 | 832 | 283 | 1110 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1jz2_D | 0 | 65 | 811 | 290 | 1018 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1jz2_C | 0 | 65 | 811 | 290 | 1018 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1jz2_B | 0 | 65 | 811 | 290 | 1018 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1jz2_A | 0 | 65 | 811 | 290 | 1018 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1jz1_P | 0 | 65 | 811 | 290 | 1018 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY305670 | 416 | 237 | 641 | 0 |
| CX077400 | 289 | 523 | 811 | 0 |
| DN959395 | 292 | 358 | 649 | 0 |
| FC922106 | 278 | 237 | 514 | 0 |
| EY758607 | 277 | 461 | 737 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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