Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10028089m |
Family | GH10 |
Protein Properties | Length: 579 Molecular Weight: 64921.8 Isoelectric Point: 7.6198 |
Chromosome | Chromosome/Scaffold: 8 Start: 2036771 End: 2039259 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 225 | 484 | 0 |
TQIKSDFPFGCGMNNYILTSTEYQNWFASRFKYTTFTNQMKWYSTEKIQGEENYTIADAMLQFCEKNGISVRGHNIFWDNSKQQPSWVKKLSPEELREAA AKRINSVTSRYAGKLIAWDVVNENLHFRFFEDNLGENASAEFYRIAHQLDPNTIMFLNEYNTIELAADKESNAVNYKKKIDEILSYPGNAGMSLGIGMQG HFSSDQPDIAYMRSVLDILGSTGLPIWLTEVDVDIGPNQSQYLEEILREAYAHPAVKGII |
Full Sequence |
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Protein Sequence Length: 579 Download |
MTIIADQICI LMLFCILLYS GNGICASLYD YSATTKCLAE PRRAHYGGGL IVNPEFNRGT 60 EGWTAFGQAA IREATSKEGN KYIVAHSRTN PLDSFSQKVQ LEKGKLYSFS AWIQVSRGSD 120 TVAAVFKTSD GKLIDAGKVL AKHGCWSLLK GGLAANFTSL VEILFESKNA EMEIWADSVS 180 LQPFTKEQWR SHQDKSINKE RKRKVRFQLT SANKTALEGA VVSVTQIKSD FPFGCGMNNY 240 ILTSTEYQNW FASRFKYTTF TNQMKWYSTE KIQGEENYTI ADAMLQFCEK NGISVRGHNI 300 FWDNSKQQPS WVKKLSPEEL REAAAKRINS VTSRYAGKLI AWDVVNENLH FRFFEDNLGE 360 NASAEFYRIA HQLDPNTIMF LNEYNTIELA ADKESNAVNY KKKIDEILSY PGNAGMSLGI 420 GMQGHFSSDQ PDIAYMRSVL DILGSTGLPI WLTEVDVDIG PNQSQYLEEI LREAYAHPAV 480 KGIISFSGPA IAGFKVMPLA DKDFKNTPAG DVVDKLLAEW KSRALEATTD MKGFFEFSLF 540 HGDYNLTLKH PVTHALTSIS FKVTKHRPQR TMHVQIVD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02018 | CBM_4_9 | 8.0e-6 | 48 | 122 | 80 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
COG3693 | XynA | 2.0e-39 | 226 | 475 | 261 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 4.0e-58 | 225 | 483 | 277 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 2.0e-84 | 264 | 513 | 273 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19437.1 | 0 | 1 | 576 | 1 | 579 | unknown [Glycine max] |
RefSeq | XP_002313181.1 | 0 | 24 | 576 | 20 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313182.1 | 0 | 34 | 565 | 2 | 533 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002532419.1 | 0 | 37 | 578 | 8 | 550 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002532422.1 | 0 | 36 | 578 | 22 | 564 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1tux_A | 1e-25 | 233 | 470 | 18 | 252 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1x_A | 5e-25 | 233 | 470 | 18 | 252 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1i1w_A | 5e-25 | 233 | 470 | 18 | 252 | A Chain A, 0.89a Ultra High Resolution Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 2bnj_A | 9e-25 | 233 | 470 | 18 | 252 | A Chain A, The Xylanase Ta From Thermoascus Aurantiacus Utilizes Arabinose Decorations Of Xylan As Significant Substrate Specificity Determinants |
PDB | 1k6a_A | 3e-24 | 233 | 470 | 18 | 252 | A Chain A, Structural Studies On The Mobility In The Active Site Of The Thermoascus Aurantiacus Xylanase I |