Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10028121m |
Family | GH10 |
Protein Properties | Length: 557 Molecular Weight: 62782.6 Isoelectric Point: 5.5484 |
Chromosome | Chromosome/Scaffold: 8 Start: 1150026 End: 1152701 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 212 | 491 | 0 |
SKDFPFGSAIASTILGNLPYQKWFVERFNAAVFENELKWYATEPEQGKINYTIADQMMEFVRSNQLIARGHNIFWEDPKYTPAWVRNLTGPALQSAVNSR IQSLMNKYKEEFIHWDVSNEMLHFDFYEQRLGHDATLHFYETAHQSDPLATLFMNEFNVVETCSDENSTVDRYISRLRELKRGGVLMDGIGLESHFTVPN LPLMRAILDKLATLNLPIWLTEVDISGKLDKETQAVYLEQVLREGFSHPSVNGIMLWTALHPNGCYQMCLTDNNLQNLPA |
Full Sequence |
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Protein Sequence Length: 557 Download |
MRLSFASEQT RINHSKSATV SLNFSFADGP LYDFTAYTEC KELPEQPLYN GGMLKNHPPE 60 NFSSIAHFST GFYTPAFILH NLTPGTIYCF SIWLKIEGAN SAHVRASLKT ENSVYNCVGS 120 AAAKQGCWSF LKGGFVLDSP SNLSILFFQN SDDRDINIAV ASASLQPFTD EQWRFNQQYI 180 INTERKRAVT IHAADGSGDT LQGAEITIEQ VSKDFPFGSA IASTILGNLP YQKWFVERFN 240 AAVFENELKW YATEPEQGKI NYTIADQMME FVRSNQLIAR GHNIFWEDPK YTPAWVRNLT 300 GPALQSAVNS RIQSLMNKYK EEFIHWDVSN EMLHFDFYEQ RLGHDATLHF YETAHQSDPL 360 ATLFMNEFNV VETCSDENST VDRYISRLRE LKRGGVLMDG IGLESHFTVP NLPLMRAILD 420 KLATLNLPIW LTEVDISGKL DKETQAVYLE QVLREGFSHP SVNGIMLWTA LHPNGCYQMC 480 LTDNNLQNLP AGNIVDKLLK EWQTGEVTGH TDGHGSFSFY GFLGEYTVSV KYGNRTANST 540 FSLCQGDETR HVTIRV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 2.0e-39 | 213 | 452 | 256 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 9.0e-56 | 212 | 468 | 273 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 3.0e-75 | 248 | 493 | 267 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94921.1 | 0 | 32 | 556 | 34 | 558 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI37893.1 | 0 | 27 | 556 | 99 | 625 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 28 | 556 | 30 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 28 | 556 | 24 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 89 | 556 | 6 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v6y_A | 1e-31 | 217 | 468 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_B | 9e-31 | 217 | 447 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_A | 9e-31 | 217 | 447 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3j_A | 9e-31 | 217 | 447 | 16 | 250 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3i_A | 9e-31 | 217 | 447 | 16 | 250 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES803339 | 253 | 202 | 454 | 0 |
DY024035 | 263 | 271 | 530 | 0 |
GR953916 | 292 | 191 | 482 | 0 |
CX705541 | 238 | 320 | 557 | 0 |
GO498667 | 216 | 290 | 505 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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