Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10028637m |
Family | GH17 |
Protein Properties | Length: 387 Molecular Weight: 42872.1 Isoelectric Point: 6.1392 |
Chromosome | Chromosome/Scaffold: 8 Start: 19538138 End: 19541255 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 32 | 348 | 0 |
VGINYGQIANNLPSPSRVSVLLRSLNISRVKLYDTDPVVLSAFSNSNVDFIIGLGNEYLENMTDPAKAQSWIQQRLQPHLPQTRITCILVGNEVFKGEDT KLYSYLLPAMQTVYKTLVDLGLDKQVIVTSAHSLDILANSFPPSAGSFRQDLAVYIQPILSFHSQVKSPFLINAYPYFAYKDSPNQVPLDYVLFQPNQGT TDPITNLKYDNMLYAQIDAVYSAMKAMGHTDIEVRISETGWPSKGDENEAGATVENAELYNGNLLKRIQQKQGTPGKPSVPVDVYFFALFNENLKPGPTS ERNYGLYYPNGNPVYNI |
Full Sequence |
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Protein Sequence Length: 387 Download |
MGSFSFSSIV KLSLFFLILS DSVPRIQGLP GVGINYGQIA NNLPSPSRVS VLLRSLNISR 60 VKLYDTDPVV LSAFSNSNVD FIIGLGNEYL ENMTDPAKAQ SWIQQRLQPH LPQTRITCIL 120 VGNEVFKGED TKLYSYLLPA MQTVYKTLVD LGLDKQVIVT SAHSLDILAN SFPPSAGSFR 180 QDLAVYIQPI LSFHSQVKSP FLINAYPYFA YKDSPNQVPL DYVLFQPNQG TTDPITNLKY 240 DNMLYAQIDA VYSAMKAMGH TDIEVRISET GWPSKGDENE AGATVENAEL YNGNLLKRIQ 300 QKQGTPGKPS VPVDVYFFAL FNENLKPGPT SERNYGLYYP NGNPVYNIGI KGYLPEMDYS 360 SASPKIKILP VCLSLLIYVI AYLIYA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-6 | 192 | 341 | 153 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-89 | 32 | 348 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94377.1 | 0 | 31 | 386 | 26 | 379 | unknown [Populus trichocarpa] |
GenBank | ACU21124.1 | 0 | 33 | 385 | 38 | 385 | unknown [Glycine max] |
RefSeq | NP_565652.1 | 0 | 25 | 384 | 23 | 382 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 25 | 368 | 23 | 365 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 25 | 368 | 7 | 348 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 32 | 348 | 2 | 313 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3f55_C | 0 | 32 | 348 | 2 | 313 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3f55_B | 0 | 32 | 348 | 2 | 313 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3f55_A | 0 | 32 | 348 | 2 | 313 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3em5_D | 0 | 32 | 348 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |