Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10029855m |
Family | CE8 |
Protein Properties | Length: 363 Molecular Weight: 39448 Isoelectric Point: 9.387 |
Chromosome | Chromosome/Scaffold: 8 Start: 5210259 End: 5213547 |
Description | pectinesterase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 62 | 332 | 0 |
RVEKYGRGDFRTIQEAIDSVPANNSELVFISVAPGIYREKIIVPANKPFITISATKASHTKITWSDGGSILDSATLTVLASHFVARSLTIQNTYGSFGKA VALRVSADKAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANSFFERCLIHSLSTWGGAITAQKRVSSEENTGFTFLDCKISGVGKAVLGRP WGAYSRVVYALTYMSDVIVPQGWNDLNDHAKHNKLYYGEYRCSGPGADRSKRIAWSNSLSDVEASTFLSKD |
Full Sequence |
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Protein Sequence Length: 363 Download |
FALLIVKPCL NSVGACLRRA SPPVMSGMKL ALLQPIVFAS ITATCGFSAT IPKDISTAVL 60 IRVEKYGRGD FRTIQEAIDS VPANNSELVF ISVAPGIYRE KIIVPANKPF ITISATKASH 120 TKITWSDGGS ILDSATLTVL ASHFVARSLT IQNTYGSFGK AVALRVSADK AAFYGCRILS 180 YQHTLLDDTG NHYYSKCYIE GATDFISGNA NSFFERCLIH SLSTWGGAIT AQKRVSSEEN 240 TGFTFLDCKI SGVGKAVLGR PWGAYSRVVY ALTYMSDVIV PQGWNDLNDH AKHNKLYYGE 300 YRCSGPGADR SKRIAWSNSL SDVEASTFLS KDLTGRGTWL RNAALKFKDD FTINDANIKG 360 NR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02480 | PLN02480 | 4.0e-86 | 26 | 340 | 326 | + Probable pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-92 | 60 | 340 | 297 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 7.0e-94 | 54 | 341 | 305 | + pectinesterase | ||
PLN02682 | PLN02682 | 6.0e-107 | 47 | 342 | 312 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 1.0e-166 | 49 | 341 | 293 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 45 | 347 | 27 | 332 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 45 | 360 | 45 | 363 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 55 | 360 | 1 | 306 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 54 | 348 | 20 | 315 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 54 | 348 | 37 | 331 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 67 | 347 | 15 | 315 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2.94273e-44 | 63 | 349 | 7 | 313 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.0000000000006 | 71 | 335 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.0000000000006 | 71 | 335 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.0000000000006 | 71 | 335 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM722128 | 261 | 52 | 312 | 0 |
AM721699 | 255 | 52 | 306 | 0 |
AJ795739 | 213 | 41 | 252 | 0 |
DR952425 | 208 | 52 | 259 | 0 |
EX283718 | 204 | 156 | 359 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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