Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10029966m |
Family | CE8 |
Protein Properties | Length: 322 Molecular Weight: 34926.2 Isoelectric Point: 8.3269 |
Chromosome | Chromosome/Scaffold: 8 Start: 5199754 End: 5201148 |
Description | pectinesterase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 20 | 292 | 0 |
RVDQSGRGDFKKIQDAIDSVPSNNSKLYFIWIKPGTYREKIVVPADKPFITISGTKASNTIITWSDGGEIFQSATFTVLASDFVGRFLTIENTYGSAGKA VALRVSANRAAFYGCRILSYQDTLLDDTGNHYYSSCYIEGATDFICGNAASLFERCHIHSLSTGNGAITAQKRVSSEENTGFTFLGCKITGVGKGVLGRP WGPYSRVVYALTYMSGLVLPQGWNDWHDYAKHTNVYYGEYKCYGPGADRSNRVAWSLSLSENEAATFLTKDTI |
Full Sequence |
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Protein Sequence Length: 322 Download |
MATSSAATSS IDMSTTILIR VDQSGRGDFK KIQDAIDSVP SNNSKLYFIW IKPGTYREKI 60 VVPADKPFIT ISGTKASNTI ITWSDGGEIF QSATFTVLAS DFVGRFLTIE NTYGSAGKAV 120 ALRVSANRAA FYGCRILSYQ DTLLDDTGNH YYSSCYIEGA TDFICGNAAS LFERCHIHSL 180 STGNGAITAQ KRVSSEENTG FTFLGCKITG VGKGVLGRPW GPYSRVVYAL TYMSGLVLPQ 240 GWNDWHDYAK HTNVYYGEYK CYGPGADRSN RVAWSLSLSE NEAATFLTKD TIGGRAWLRP 300 APSNFKIGAS ATIAARTDEN N* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02671 | PLN02671 | 9.0e-91 | 8 | 299 | 309 | + pectinesterase | ||
PLN02773 | PLN02773 | 7.0e-93 | 13 | 298 | 308 | + pectinesterase | ||
PLN02665 | PLN02665 | 4.0e-97 | 18 | 303 | 299 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-111 | 19 | 300 | 299 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 0 | 7 | 299 | 293 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 4 | 313 | 31 | 340 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 4 | 321 | 49 | 365 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 13 | 321 | 1 | 308 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 4 | 306 | 12 | 315 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 12 | 320 | 37 | 346 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 19 | 308 | 9 | 318 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 21 | 299 | 7 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.000000000000005 | 29 | 293 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.000000000000005 | 29 | 293 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.000000000000005 | 29 | 293 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM722128 | 255 | 12 | 266 | 0 |
AM721699 | 253 | 12 | 264 | 0 |
DR952425 | 206 | 12 | 217 | 0 |
AJ795739 | 212 | 1 | 210 | 0 |
EX283718 | 192 | 114 | 305 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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