| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10030068m |
| Family | GH2 |
| Protein Properties | Length: 284 Molecular Weight: 32758.8 Isoelectric Point: 5.7344 |
| Chromosome | Chromosome/Scaffold: 8 Start: 14355774 End: 14362588 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH2 | 88 | 276 | 0 |
| FVKSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRIFLHFEAVDS AFCAWINGVPVGYSQDSRLPAEFEISDYCYPHGSDKKNVLAVQVFRWSDGSYLEDQDHWWLSGIHRDVLLLAKPQVFIADYFFKSNLAE | |||
| Full Sequence |
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| Protein Sequence Length: 284 Download |
| MASLVGQLPF ALENANGYKV WEDPSFIKWR KRDPHVTLRC HDSVEGSLKY WYERNKVDIS 60 VSNSAVWDDD AVHEALTSAA FWTNGLPFVK SLSGHWKFFL ASSPPDVPLN FHKSSFQDSK 120 WEAIPVPSNW QMHGFDRPIY TNVVYPFPLD PPNVPAENPT GCYRTYFHIP KEWQGRRIFL 180 HFEAVDSAFC AWINGVPVGY SQDSRLPAEF EISDYCYPHG SDKKNVLAVQ VFRWSDGSYL 240 EDQDHWWLSG IHRDVLLLAK PQVFIADYFF KSNLAEDFSL ADIQ |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10150 | PRK10150 | 2.0e-14 | 89 | 283 | 210 | + beta-D-glucuronidase; Provisional | ||
| COG3250 | LacZ | 4.0e-43 | 89 | 278 | 192 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| pfam02837 | Glyco_hydro_2_N | 2.0e-63 | 87 | 261 | 177 | + Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. | ||
| PRK10340 | ebgA | 3.0e-67 | 90 | 278 | 189 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| PRK09525 | lacZ | 3.0e-79 | 87 | 284 | 202 | + beta-D-galactosidase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE98865.1 | 0 | 1 | 284 | 1 | 282 | beta Galactosidase - like protein [Arabidopsis thaliana] |
| RefSeq | XP_002266400.1 | 0 | 1 | 284 | 1 | 282 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002266434.1 | 0 | 1 | 284 | 1 | 282 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002299206.1 | 0 | 1 | 284 | 1 | 282 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002513059.1 | 0 | 1 | 284 | 1 | 282 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3czj_D | 0 | 89 | 284 | 51 | 241 | A Chain A, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With D- Galctopyranosyl-1-One" |
| PDB | 3czj_C | 0 | 89 | 284 | 51 | 241 | A Chain A, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With D- Galctopyranosyl-1-One" |
| PDB | 3czj_B | 0 | 89 | 284 | 51 | 241 | A Chain A, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With D- Galctopyranosyl-1-One" |
| PDB | 3czj_A | 0 | 89 | 284 | 51 | 241 | A Chain A, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With D- Galctopyranosyl-1-One" |
| PDB | 3dyp_D | 0 | 89 | 284 | 51 | 241 | A Chain A, "e. Coli (Lacz) Beta-Galactosidase (N460t) In Complex With D- Galctopyranosyl-1-One" |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CK261494 | 284 | 1 | 284 | 0 |
| EY656422 | 214 | 1 | 214 | 0 |
| CX070336 | 209 | 76 | 284 | 0 |
| HO791335 | 268 | 2 | 269 | 0 |
| EY721342 | 226 | 1 | 226 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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