Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10030318m |
Family | CE8 |
Protein Properties | Length: 285 Molecular Weight: 31124.4 Isoelectric Point: 8.844 |
Chromosome | Chromosome/Scaffold: 8 Start: 5286878 End: 5288051 |
Description | pectinesterase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 43 | 278 | 0 |
RVEKYGRGDFRTIQEAIDSVPDNNSELVFISVAPGIYREKIIVPANKPFITISGTKASRTKITWSDGGSILDSATLTVLASHFVARSLTIQNTYGSYGKA VALRVSADRAAFYGCRILSYQHTLLDDTGNHYYSKCYIEGATDFISGNANSLFERCLIHSLSTWGGAITAQKRVSSEENTGFTFLDCKISGVGKAVLGRP WGPYSRVVYALTYMSDVILPQGWNDLNDHAKQKYII |
Full Sequence |
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Protein Sequence Length: 285 Download |
MKNYSQNVSI LFVATTIVFA SITATCGSTA TIPKDFSTAV LIRVEKYGRG DFRTIQEAID 60 SVPDNNSELV FISVAPGIYR EKIIVPANKP FITISGTKAS RTKITWSDGG SILDSATLTV 120 LASHFVARSL TIQNTYGSYG KAVALRVSAD RAAFYGCRIL SYQHTLLDDT GNHYYSKCYI 180 EGATDFISGN ANSLFERCLI HSLSTWGGAI TAQKRVSSEE NTGFTFLDCK ISGVGKAVLG 240 RPWGPYSRVV YALTYMSDVI LPQGWNDLND HAKQKYIIYS INLL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02497 | PLN02497 | 1.0e-74 | 42 | 280 | 252 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 3.0e-76 | 8 | 279 | 314 | + pectinesterase family protein | ||
PLN02671 | PLN02671 | 2.0e-81 | 27 | 279 | 270 | + pectinesterase | ||
PLN02682 | PLN02682 | 2.0e-93 | 34 | 279 | 262 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 2.0e-144 | 30 | 279 | 250 | + putative pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN79458.1 | 0 | 28 | 279 | 32 | 283 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37658.1 | 0 | 28 | 279 | 50 | 301 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002280496.1 | 0 | 36 | 279 | 1 | 244 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305435.1 | 0 | 35 | 280 | 20 | 266 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512914.1 | 0 | 35 | 280 | 37 | 282 | Pectinesterase-3 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 3.00004e-41 | 48 | 265 | 15 | 249 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 2e-34 | 44 | 279 | 7 | 259 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.0000000000003 | 51 | 279 | 43 | 317 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 0.000000000008 | 52 | 245 | 18 | 247 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 0.000000000008 | 52 | 245 | 18 | 247 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |