y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10030393m |
Family | GH100 |
Protein Properties | Length: 566 Molecular Weight: 64704.3 Isoelectric Point: 6.3645 |
Chromosome | Chromosome/Scaffold: 8 Start: 7899376 End: 7902959 |
Description | Plant neutral invertase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 97 | 552 | 0 |
PHPMVGEAWDALRRSLVYFRGNPVGTIAALDSSEEELNYDQVFVRDFVPSALAFLMNGEPEIVKNFILKTLRLQSWEKKIDRFQLGEGVMPASFKVLHDP IRNTETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAELPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFM ALRCALVLLKQDDEGKEFVERIVKRLHALNYHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPIRGGYFIGNVSPAKMDFRWFA LGNCIAILSSLATEEQSNAIMDLIESRWEELVGEMPIKVCYPAIESHDWRIITGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIELAESR LLKDSWPEYYDGKLGRYIGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQ |
Full Sequence |
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Protein Sequence Length: 566 Download |
MDTLCTVAEC NECDFSKLSE KPRSLNMDRE RQRSFDERSL SELSIGFSPR VMTRSADNAN 60 ANANFSRLVI DHNPDAPFSP GRRSGFNTPR SLIGYEPHPM VGEAWDALRR SLVYFRGNPV 120 GTIAALDSSE EELNYDQVFV RDFVPSALAF LMNGEPEIVK NFILKTLRLQ SWEKKIDRFQ 180 LGEGVMPASF KVLHDPIRNT ETLIADFGES AIGRVAPVDS GFWWIILLRA YTKSTGDSSL 240 AELPECQKGM RLILSLCLSE GFDTFPTLLC ADGCCMIDRR MGVYGYPIEI QALFFMALRC 300 ALVLLKQDDE GKEFVERIVK RLHALNYHMR SYFWLDLKQL NDIYRYKTEE YSHTAVNKFN 360 VIPDSLPEWV FDFMPIRGGY FIGNVSPAKM DFRWFALGNC IAILSSLATE EQSNAIMDLI 420 ESRWEELVGE MPIKVCYPAI ESHDWRIITG CDPKNTRWSY HNGGSWPVLL WLLTAACIKT 480 GRPQIARRAI ELAESRLLKD SWPEYYDGKL GRYIGKQARK FQTWSIAGYL VAKMMLEDPS 540 HLGMISLEED KQLKPLLRRS HSWTF* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 4.0e-5 | 459 | 534 | 79 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN02973 | PLN02973 | 0 | 1 | 564 | 566 | + beta-fructofuranosidase | ||
PLN03005 | PLN03005 | 0 | 5 | 564 | 563 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 103 | 539 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 103 | 554 | 458 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAP59641.1 | 0 | 1 | 565 | 17 | 573 | putative neutral invertase [Vitis vinifera] |
EMBL | CAP59642.1 | 0 | 1 | 565 | 17 | 573 | putative neutral invertase [Vitis vinifera] |
RefSeq | XP_002276670.1 | 0 | 1 | 565 | 17 | 572 | PREDICTED: similar to putative neutral invertase [Vitis vinifera] |
RefSeq | XP_002306166.1 | 0 | 1 | 565 | 17 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312983.1 | 0 | 2 | 565 | 18 | 574 | predicted protein [Populus trichocarpa] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES848839 | 360 | 199 | 556 | 0 |
DY262604 | 313 | 86 | 398 | 0 |
CK269009 | 331 | 236 | 566 | 0 |
DY262604 | 31 | 412 | 442 | 0.0003 |
DY262604 | 89 | 397 | 476 | 0.002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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