CAZyme Information

Basic Information
SpeciesCitrus clementina
Cazyme IDCiclev10031174m
FamilyGH20
Protein PropertiesLength: 541 Molecular Weight: 61041.4 Isoelectric Point: 6.0922
ChromosomeChromosome/Scaffold: 4 Start: 3135018 End: 3141002
Descriptionbeta-hexosaminidase 1
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH201774880
  YIQDKPRFAFRGLLIDTSRHYLPVDVIKQIIESMSYAKLNVLHWHIIDEQSFPLEVPTYPNLWKGAYSKWERYTVEDAHEIVGFAKMRGINVMAEVDVPG
  HAESWGAGYPNLWPSPSCREPLDVSKNFTFEVISGILSDLRKIFPFELFHLGGDEVNTDCWSSTPHVKKWLRDHKMTAKEAYQYFVLTAQKIAISKNWTP
  VNWEETFNSFASNLNPRTVVHNWLGGGVCPKAVAKGFRCIYSNQGFWYLDHLDVPWDEVYTAEPLEGISDPSNQELVLGGEVCMWGETADTSDIHQTIWP
  RAAAAAERLWSR
Full Sequence
Protein Sequence     Length: 541     Download
MLLKSQEHLS VLKVIIITAL LIIFTSSLSV STDVDDSLAY IWPLPAQFTS GNDTLSVDPA    60
LYLSVSGKGS GSKIVKEAFE RYKAIIFEHE VEGVNSHSVF NNFRKRRSWG FDIGTLKIVV    120
HSDNEDLQLG VDESYTLLVA KNEGLSIIGE ATIETFSQLC SFDYDTKSVL VYKAPWYIQD    180
KPRFAFRGLL IDTSRHYLPV DVIKQIIESM SYAKLNVLHW HIIDEQSFPL EVPTYPNLWK    240
GAYSKWERYT VEDAHEIVGF AKMRGINVMA EVDVPGHAES WGAGYPNLWP SPSCREPLDV    300
SKNFTFEVIS GILSDLRKIF PFELFHLGGD EVNTDCWSST PHVKKWLRDH KMTAKEAYQY    360
FVLTAQKIAI SKNWTPVNWE ETFNSFASNL NPRTVVHNWL GGGVCPKAVA KGFRCIYSNQ    420
GFWYLDHLDV PWDEVYTAEP LEGISDPSNQ ELVLGGEVCM WGETADTSDI HQTIWPRAAA    480
AAERLWSRRE AISSGNITLT ALPRLHYFRC LLNRRGVQAA PVLNKYAREP PIGPGSCYVQ    540

Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02742GH20_hexosaminidase2.0e-57187487322+
cd06563GH20_chitobiase-like2.0e-68184487350+
cd06570GH20_chitobiase-like_14.0e-71184490318+
pfam00728Glyco_hydro_209.0e-99184487334+
cd06562GH20_HexA_HexB-like5.0e-149184516353+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004563beta-N-acetylhexosaminidase activity
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
DDBJBAE99290.10105404541beta-N-acetylhexosaminidase -like protein [Arabidopsis thaliana]
EMBLCAB75760.10105404557beta-N-acetylhexosaminidase-like protein [Arabidopsis thaliana]
RefSeqNP_567017.20105404541HEXO1 (BETA-HEXOSAMINIDASE 1); beta-N-acetylhexosaminidase/ hexosaminidase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana]
RefSeqXP_002282535.1085406541PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002316315.10205408531predicted protein [Populus trichocarpa]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2gk1_G0415221495B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_E0415221495B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_C0415221495B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gk1_A0415221495B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
PDB2gjx_H0415221495B Chain B, X-Ray Crystal Structure Of Ngt-Bound Hexa
Transmembrane Domains
StartEnd
931
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
HO8039823891535410
DY2671843082035100
DY275488346583910
FC9080992902034920
DY267184444985410.00004
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_022_00071.4Aquca_022_00071.3Aquca_022_00071.2Aquca_022_00071.1Aquca_010_00682.1
Aquca_004_00645.1
Arabidopsis lyrata475658485946470561
Arabidopsis thalianaAT1G65590.1AT3G55260.1AT1G05590.1
Brachypodium distachyonBradi2g57420.1Bradi2g25310.1Bradi2g37460.1Bradi3g44607.1Bradi1g69660.1
Bradi1g23740.1
Brassica rapaBra004121Bra014765Bra032460
Carica papayaevm.model.supercontig_197.26
Capsella rubellaCarubv10020116mCarubv10016974mCarubv10011603m
Chlamydomonas reinhardtiig11709.t1
Citrus clementinaCiclev10014808mCiclev10031139mCiclev10031669mCiclev10033772mCiclev10019509m
Ciclev10024601m
Citrus sinensisorange1.1g008945morange1.1g013337morange1.1g008821morange1.1g014971morange1.1g044344m
orange1.1g007722morange1.1g007610m
Cucumis sativusCucsa.165600.1Cucsa.178740.1Cucsa.165600.2.144.314Cucsa.165600.2.144.314Cucsa.177460.1
Cucsa.165600.2.312.421Cucsa.165600.2.312.421
Eucalyptus grandisEucgr.G02896.1Eucgr.L01476.1Eucgr.K02799.2Eucgr.K02799.1Eucgr.K02799.3
Eucgr.K02798.2Eucgr.K02798.1
Fragaria vescamrna26730.1-v1.0-hybridmrna02330.1-v1.0-hybrid
Glycine maxGlyma18g52290.1Glyma02g10570.1Glyma10g43710.1Glyma20g38400.1Glyma08g17200.1
Glyma08g16970.1Glyma15g41986.1
Gossypium raimondiiGorai.002G136400.2Gorai.002G136400.1Gorai.011G246500.1Gorai.012G068200.1Gorai.012G068200.2
Gorai.002G136400.3Gorai.012G068200.3Gorai.007G264000.1
Linum usitatissimumLus10003292Lus10030323Lus10022251Lus10030348Lus10007899
Malus domesticaMDP0000798095MDP0000262060.270.444MDP0000262060.270.444MDP0000564236MDP0000262060.174.257
MDP0000262060.174.257
Manihot esculentacassava4.1_033827mcassava4.1_033064mcassava4.1_004406mcassava4.1_007813mcassava4.1_023099m
cassava4.1_021615m
Medicago truncatulaMedtr2g062560.1
Mimulus guttatusmgv1a004365mmgv1a003720mmgv1a007861mmgv1a003512mmgv1a023788m
Oryza sativaLOC_Os01g66700.1LOC_Os05g34320.2LOC_Os05g34320.1LOC_Os05g02510.1LOC_Os05g34320.3
LOC_Os07g38790.1LOC_Os03g11980.1
Panicum virgatumPavirv00023753mPavirv00005093mPavirv00062644mPavirv00067910mPavirv00063863m
Pavirv00062646mPavirv00001875mPavirv00056279mPavirv00062645m.258.396Pavirv00062645m.258.396
Pavirv00060770mPavirv00016511mPavirv00054866mPavirv00049460mPavirv00062645m.174.254
Pavirv00062645m.174.254
Physcomitrella patensPp1s70_132V6.1Pp1s3_199V6.1
Phaseolus vulgarisPhvul.008G015400.1Phvul.007G010100.1Phvul.005G045300.1Phvul.005G043200.1
Picea abiesMA_177334g0010MA_271570g0010MA_92690g0010.179.289MA_92690g0010.179.289MA_92690g0010.297.429
MA_92690g0010.297.429
Populus trichocarpaPotri.008G079400.2Potri.008G079400.1Potri.010G211000.2Potri.010G211000.1Potri.010G211000.4
Potri.010G211000.3Potri.008G079400.5Potri.008G079400.3Potri.008G079400.4Potri.001G232800.1
Potri.001G232600.1
Prunus persicappa003880mppa002753m
Ricinus communis29929.m00450328180.m00037729616.m00021628180.m00037634575.m000024
47890.m000013
Setaria italicaSi001028mSi021738mSi024695mSi021693mSi029311m
Si034794m
Selaginella moellendorffii117332429308422139422155445016
422160429325441789422260
Sorghum bicolorSb09g020420.2Sb09g020420.1Sb09g001670.1Sb02g037280.1Sb01g042640.1
Thellungiella halophilaThhalv10018379mThhalv10010264mThhalv10007181mThhalv10007179m
Vitis viniferaGSVIVT01016639001GSVIVT01006264001GSVIVT01004010001GSVIVT01006000001
Volvox carteriVocar20013124m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)