| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10031872m |
| Family | CE8 |
| Protein Properties | Length: 371 Molecular Weight: 40284.3 Isoelectric Point: 7.1632 |
| Chromosome | Chromosome/Scaffold: 4 Start: 14661692 End: 14663367 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 73 | 358 | 0 |
| IKVNQDGSGEFKTINDAINSIPQGNTKRVILSIGAGEYVEKIKIDRSKPFITFYGSPDAMPNVTFGGTAKEYGTVDSATLIVESDYFMAVNIIIANSSPR PDGKREGAQAVALRISGTKAAFYNCKIIGFQDTLCDDRGNHFFKDCHIQGTVDFIFGSGKSLYLSTELRAMGDTGLTVITAHARESESEDNGFAFVHCTI EGSGNGTYLGRAWKNSPRVVYAYTTMGNVVNRAGWSDNFRPERRQTVFYGEYKCSGPGASPAERVEYTKQLSDAEARPFLVLDYVQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 371 Download |
| MTHHVAAVFT FIIFIINHLA NSANGGGGGD GAVIPPEKSQ IESWFTANVK PYTERKTTLD 60 PALSTAQAGQ RVIKVNQDGS GEFKTINDAI NSIPQGNTKR VILSIGAGEY VEKIKIDRSK 120 PFITFYGSPD AMPNVTFGGT AKEYGTVDSA TLIVESDYFM AVNIIIANSS PRPDGKREGA 180 QAVALRISGT KAAFYNCKII GFQDTLCDDR GNHFFKDCHI QGTVDFIFGS GKSLYLSTEL 240 RAMGDTGLTV ITAHARESES EDNGFAFVHC TIEGSGNGTY LGRAWKNSPR VVYAYTTMGN 300 VVNRAGWSDN FRPERRQTVF YGEYKCSGPG ASPAERVEYT KQLSDAEARP FLVLDYVQGN 360 QWILPPPAKV * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02432 | PLN02432 | 1.0e-87 | 72 | 363 | 292 | + putative pectinesterase |
| PLN02304 | PLN02304 | 8.0e-89 | 75 | 365 | 299 | + probable pectinesterase |
| PLN02671 | PLN02671 | 3.0e-89 | 69 | 363 | 305 | + pectinesterase |
| PLN02682 | PLN02682 | 1.0e-104 | 71 | 365 | 303 | + pectinesterase family protein |
| PLN02665 | PLN02665 | 0 | 34 | 368 | 335 | + pectinesterase family protein |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38547.1 | 0 | 8 | 370 | 5 | 366 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI38548.1 | 0 | 1 | 370 | 5 | 371 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277202.1 | 0 | 30 | 367 | 27 | 364 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277388.1 | 0 | 1 | 370 | 1 | 367 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318197.1 | 0 | 30 | 367 | 25 | 363 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 6e-38 | 75 | 363 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 4e-37 | 73 | 363 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 2e-18 | 72 | 351 | 8 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 2e-18 | 72 | 351 | 8 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 2e-18 | 72 | 351 | 8 | 328 | A Chain A, Pectin Methylesterase From Carrot |
