| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10033928m |
| Family | GH17 |
| Protein Properties | Length: 364 Molecular Weight: 39948.1 Isoelectric Point: 6.3089 |
| Chromosome | Chromosome/Scaffold: 4 Start: 763154 End: 764245 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH17 | 50 | 355 | 0 |
| PPPDRVASIVTSLNIPAVRLPNSDPSLIRAFAYTNTTILLSIPNAFVPTLAANRTLAQRWLYRHVLPFYPRSKISLISVGNDIFDTTPDLSPFLLPAVRN VHLALHDLGIKKIPVSTTFSFFNIITTSFPPSSAQFQEPAGSLIMKPLLQFLEDTNSSFLVNVYPYNMYRLNCEIPLGFALFENYPFNFRDDLITGVRYT NLFDVMVDAVISAMAVAGHENIPVIVAETGWPSSGADASEVDATPALAEMYLKGLVAHLKSGMGSPLRREGVAEAYVYELVDIEVKGERSWGILHQNFTQ KYEIEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 364 Download |
| MASSSSLAFA LLIVLSLLHS TSSSRPLIGV TYAPPILAPT IANPHPPPPP PPDRVASIVT 60 SLNIPAVRLP NSDPSLIRAF AYTNTTILLS IPNAFVPTLA ANRTLAQRWL YRHVLPFYPR 120 SKISLISVGN DIFDTTPDLS PFLLPAVRNV HLALHDLGIK KIPVSTTFSF FNIITTSFPP 180 SSAQFQEPAG SLIMKPLLQF LEDTNSSFLV NVYPYNMYRL NCEIPLGFAL FENYPFNFRD 240 DLITGVRYTN LFDVMVDAVI SAMAVAGHEN IPVIVAETGW PSSGADASEV DATPALAEMY 300 LKGLVAHLKS GMGSPLRREG VAEAYVYELV DIEVKGERSW GILHQNFTQK YEIEFSRACK 360 IESV |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-5 | 270 | 346 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-56 | 55 | 355 | 307 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71832.1 | 0 | 22 | 311 | 26 | 307 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_191137.1 | 0 | 28 | 362 | 31 | 360 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002276218.1 | 0 | 22 | 360 | 26 | 360 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002316237.1 | 0 | 53 | 364 | 62 | 371 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530412.1 | 0 | 19 | 356 | 28 | 357 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 50 | 355 | 13 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 2e-40 | 50 | 356 | 14 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 2e-40 | 50 | 356 | 14 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 2e-40 | 50 | 356 | 14 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 2e-40 | 50 | 356 | 14 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
