y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10034006m |
Family | GH27 |
Protein Properties | Length: 183 Molecular Weight: 20073.8 Isoelectric Point: 5.6028 |
Chromosome | Chromosome/Scaffold: 4 Start: 2045224 End: 2050369 |
Description | Melibiase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH27 | 11 | 114 | 4.1e-33 |
WASYAGPGGWNDPDMLEVGNGGMSYQEYRAHFSIWALMKAPLLIGCDVRNLTAETFEILSNKEVIAVNQDPLGVQGRKVYVSGTDNCLQVWVGPLSGHRL VVAL |
Full Sequence |
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Protein Sequence Length: 183 Download |
MTSIADINDK WASYAGPGGW NDPDMLEVGN GGMSYQEYRA HFSIWALMKA PLLIGCDVRN 60 LTAETFEILS NKEVIAVNQD PLGVQGRKVY VSGTDNCLQV WVGPLSGHRL VVALWNRCPK 120 AETITAQWDA LGLESSTKVS VRDLWQHKQV TGDAVSSFGA QVDAHDCQMY IFTPRTVTRS 180 VI* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02899 | PLN02899 | 1.0e-5 | 20 | 78 | 72 | + alpha-galactosidase | ||
PLN03231 | PLN03231 | 4.0e-7 | 12 | 83 | 85 | + putative alpha-galactosidase; Provisional | ||
PLN02692 | PLN02692 | 1.0e-73 | 1 | 174 | 174 | + alpha-galactosidase | ||
PLN02808 | PLN02808 | 1.0e-82 | 1 | 175 | 175 | + alpha-galactosidase | ||
PLN02229 | PLN02229 | 4.0e-116 | 1 | 182 | 182 | + alpha-galactosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN75523.1 | 0 | 1 | 182 | 268 | 449 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_974447.1 | 0 | 1 | 180 | 232 | 411 | alpha-galactosidase, putative / melibiase, putative / alpha-D-galactoside galactohydrolase, putative [Arabidopsis thaliana] |
RefSeq | XP_002279730.1 | 0 | 1 | 182 | 246 | 427 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325481.1 | 0 | 1 | 174 | 207 | 380 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520852.1 | 0 | 1 | 177 | 179 | 355 | alpha-galactosidase/alpha-n-acetylgalactosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1uas_A | 0 | 1 | 174 | 193 | 361 | A Chain A, Crystal Structure Of Rice Alpha-Galactosidase |
PDB | 3a5v_A | 7e-34 | 15 | 172 | 231 | 390 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktc_A | 1e-26 | 8 | 177 | 220 | 389 | A Chain A, Crystal Structure Of Alpha-Galactosidase I From Mortierella Vinacea |
PDB | 1ktb_A | 1e-26 | 8 | 177 | 220 | 389 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 3a23_B | 1e-25 | 18 | 176 | 232 | 387 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EY713394 | 182 | 2 | 183 | 0 |
FG411477 | 183 | 1 | 183 | 0 |
EG685649 | 177 | 1 | 177 | 0 |
EG692506 | 177 | 1 | 177 | 0 |
FR607230 | 183 | 1 | 183 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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