| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre01.g041850.t1.3 |
| Family | GT49 |
| Protein Properties | Length: 523 Molecular Weight: 54934.4 Isoelectric Point: 9.8824 |
| Chromosome | Chromosome/Scaffold: 1 Start: 5853628 End: 5858039 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT49 | 66 | 365 | 0 |
| SLYLHQALISAKPAPLPVTIFVGATLERLGALEAQCRAWPRGPLSAALYLPLLQRQDGRRLTPDNTQALRGAADTVRELFERMEAAGASACSLTALLLYE AVADPALAALVPINALRDAALLPAATPLVAMVDVDLAPSASLAGQVAAPGQERLAQLQRAAESGRVAWILPAWETHKRLGLEEGGHVADTAIAGDKSGLR RLVDQSALHYFARLAYRRGHGPTNFTRWLDALEPYTVPYADNYEPWFIISRTLCPPYDVRFRGYGWNKVQQVALVALTNFTFVVHPDAWLVHRPHPKSRS | |||
| Full Sequence |
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| Protein Sequence Length: 523 Download |
| MARIKRATVF LLQSFIITLA KTAWGARLLQ QSTADDRASA LQNCYNEHYN GTASVFEDFL 60 RGFNTSLYLH QALISAKPAP LPVTIFVGAT LERLGALEAQ CRAWPRGPLS AALYLPLLQR 120 QDGRRLTPDN TQALRGAADT VRELFERMEA AGASACSLTA LLLYEAVADP ALAALVPINA 180 LRDAALLPAA TPLVAMVDVD LAPSASLAGQ VAAPGQERLA QLQRAAESGR VAWILPAWET 240 HKRLGLEEGG HVADTAIAGD KSGLRRLVDQ SALHYFARLA YRRGHGPTNF TRWLDALEPY 300 TVPYADNYEP WFIISRTLCP PYDVRFRGYG WNKVQQVALV ALTNFTFVVH PDAWLVHRPH 360 PKSRSQQLYD TSGLGAGAQA AAAAAGRGGA GGGGAGGGRG GAGAGGGGGA VEETREWKGS 420 RAPLSRLFHR RVAALRHVTI RDMRRRTYAA AVGPQVLACR AALPWWAGVD PEPGGWGTGL 480 WGPNGTEAGA VGAGVGAEVG AVGAGSRGGG GGRGLLGGQG GG* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13896 | Glyco_transf_49 | 6.0e-34 | 82 | 360 | 308 | + Glycosyl-transferase for dystroglycan. This glycosyl-transferase brings about the glycosylation of the alpha-dystroglycan subunit. Dystroglycan is an integral member of the skeletal muscular dystrophin glycoprotein complex, which links dystrophin to proteins in the extracellular matrix. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAH03159.1 | 0 | 60 | 466 | 1 | 378 | InvC [Volvox carteri f. nagariensis] |
| GenBank | EDL79564.1 | 4e-31 | 69 | 363 | 316 | 572 | glycosyltransferase-like 1B, isoform CRA_b [Rattus norvegicus] |
| RefSeq | NP_954538.1 | 4e-31 | 69 | 363 | 385 | 641 | glycosyltransferase-like 1B [Rattus norvegicus] |
| RefSeq | XP_001696547.1 | 0 | 75 | 465 | 23 | 394 | hypothetical protein CHLREDRAFT_187123 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001700806.1 | 0 | 89 | 341 | 9 | 281 | hypothetical protein CHLREDRAFT_187466 [Chlamydomonas reinhardtii] |
| Signal Peptide | ||||
|---|---|---|---|---|
| Cleavage Site | ||||
| 25 | ||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FD804992 | 255 | 51 | 305 | 3.99931e-42 |
| FD828047 | 164 | 199 | 360 | 3e-24 |
| FD803838 | 217 | 155 | 367 | 5e-22 |
| FD929862 | 163 | 206 | 368 | 1e-21 |
| GE262039 | 249 | 83 | 329 | 3e-20 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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