| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre02.g117250.t1.3 |
| Family | GH42 |
| Protein Properties | Length: 506 Molecular Weight: 57477.6 Isoelectric Point: 6.4164 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6597560 End: 6605294 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH42 | 38 | 278 | 1.6e-27 |
| QTDKLVATLKQMQATGIKTVVYSISWQWAEPEPGKVRTEYISWLLDAACKNTGLQVDLIVDLLNPPDWFWRQYPDARPLDSDGRNYTRMSWFHPQGNKAA LTLLSSVATHLASNYPGCAKAIQPVYNNEYEAKYTQEYDSFQDYGPYALAEYRRWLQAKTQDVNVINLRWGKRYKTWDEVRPPALHSGDFQGVDFSADYW DFVRFREEFGAAHYNKACATVHAAGLMCFHHFPEFFTVIDA | |||
| Full Sequence |
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| Protein Sequence Length: 506 Download |
| MNGVKSVRKF KPNDTFGTIF HLELLMFYKA MEAPDVRQTD KLVATLKQMQ ATGIKTVVYS 60 ISWQWAEPEP GKVRTEYISW LLDAACKNTG LQVDLIVDLL NPPDWFWRQY PDARPLDSDG 120 RNYTRMSWFH PQGNKAALTL LSSVATHLAS NYPGCAKAIQ PVYNNEYEAK YTQEYDSFQD 180 YGPYALAEYR RWLQAKTQDV NVINLRWGKR YKTWDEVRPP ALHSGDFQGV DFSADYWDFV 240 RFREEFGAAH YNKACATVHA AGLMCFHHFP EFFTVIDAMY GATMFRLIAS SPFTDFVIMD 300 SNFMTPYGTV MNPHKLRVYI SAAHAYGKPV YFEAAVERFK DFDLLASGFY NSMLAGADNI 360 GITNWHTRVD MNASLTKAMH TAPTCGSCEV VGVFLHLQSC AAYHGLQWKW ARKDPLHDMV 420 EELAEKLHDG DCGTDIAVYI ELDKFLADMG SFSRAVFVEP LVLWGTAEMD NYIKVKSALE 480 KLPHTIMHMP TNVTSGPQLM VLADL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 0.001 | 46 | 242 | 214 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02449 | Glyco_hydro_42 | 1.0e-13 | 46 | 224 | 193 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001699636.1 | 3e-34 | 1 | 62 | 1 | 62 | hypothetical protein CHLREDRAFT_93467 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001699637.1 | 0 | 236 | 505 | 17 | 290 | hypothetical protein CHLREDRAFT_141593 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001699638.1 | 0 | 46 | 505 | 1 | 452 | hypothetical protein CHLREDRAFT_141595 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001702441.1 | 0 | 10 | 401 | 71 | 432 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | YP_723893.1 | 3e-25 | 52 | 483 | 619 | 1055 | hypothetical protein Tery_4433 [Trichodesmium erythraeum IMS101] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1kwk_A | 0.0000000005 | 47 | 279 | 21 | 252 | A Chain A, Crystal Structure Of Thermus Thermophilus A4 Beta-Galactosidase |
| PDB | 1kwg_A | 0.0000000005 | 47 | 279 | 21 | 252 | A Chain A, Crystal Structure Of Thermus Thermophilus A4 Beta-Galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BI724308 | 207 | 82 | 288 | 0 |
| BI999373 | 202 | 208 | 409 | 0 |
| BI816504 | 182 | 168 | 349 | 0 |
| FC105887 | 142 | 365 | 506 | 0 |
| BI724602 | 176 | 208 | 383 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | Cre02.g117250.t2.1 | Cre02.g119700.t1.3 | g5804.t1 | ||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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