| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre02.g117250.t2.1 |
| Family | GH42 |
| Protein Properties | Length: 528 Molecular Weight: 60035.5 Isoelectric Point: 6.4178 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6597560 End: 6605294 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH42 | 60 | 300 | 1.8e-27 |
| QTDKLVATLKQMQATGIKTVVYSISWQWAEPEPGKVRTEYISWLLDAACKNTGLQVDLIVDLLNPPDWFWRQYPDARPLDSDGRNYTRMSWFHPQGNKAA LTLLSSVATHLASNYPGCAKAIQPVYNNEYEAKYTQEYDSFQDYGPYALAEYRRWLQAKTQDVNVINLRWGKRYKTWDEVRPPALHSGDFQGVDFSADYW DFVRFREEFGAAHYNKACATVHAAGLMCFHHFPEFFTVIDA | |||
| Full Sequence |
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| Protein Sequence Length: 528 Download |
| MNGVKSVRKF KPNDTFGEPS VRKRLAKPWV TFVDDVEFGT IFHLELLMFY KAMEAPDVRQ 60 TDKLVATLKQ MQATGIKTVV YSISWQWAEP EPGKVRTEYI SWLLDAACKN TGLQVDLIVD 120 LLNPPDWFWR QYPDARPLDS DGRNYTRMSW FHPQGNKAAL TLLSSVATHL ASNYPGCAKA 180 IQPVYNNEYE AKYTQEYDSF QDYGPYALAE YRRWLQAKTQ DVNVINLRWG KRYKTWDEVR 240 PPALHSGDFQ GVDFSADYWD FVRFREEFGA AHYNKACATV HAAGLMCFHH FPEFFTVIDA 300 MYGATMFRLI ASSPFTDFVI MDSNFMTPYG TVMNPHKLRV YISAAHAYGK PVYFEAAVER 360 FKDFDLLASG FYNSMLAGAD NIGITNWHTR VDMNASLTKA MHTAPTCGSC EVVGVFLHLQ 420 SCAAYHGLQW KWARKDPLHD MVEELAEKLH DGDCGTDIAV YIELDKFLAD MGSFSRAVFV 480 EPLVLWGTAE MDNYIKVKSA LEKLPHTIMH MPTNVTSGPQ LMVLADL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 0.002 | 68 | 264 | 214 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02449 | Glyco_hydro_42 | 1.0e-13 | 68 | 246 | 193 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001699636.1 | 1e-29 | 1 | 84 | 1 | 62 | hypothetical protein CHLREDRAFT_93467 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001699637.1 | 0 | 258 | 527 | 17 | 290 | hypothetical protein CHLREDRAFT_141593 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001699638.1 | 0 | 68 | 527 | 1 | 452 | hypothetical protein CHLREDRAFT_141595 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001702441.1 | 0 | 40 | 423 | 78 | 432 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | YP_723893.1 | 4e-25 | 74 | 505 | 619 | 1055 | hypothetical protein Tery_4433 [Trichodesmium erythraeum IMS101] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1kwk_A | 0.0000000005 | 69 | 301 | 21 | 252 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
| PDB | 1kwg_A | 0.0000000005 | 69 | 301 | 21 | 252 | A Chain A, Crystal Structure Of Thermus Thermophilus A4 Beta-Galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| BI724308 | 207 | 104 | 310 | 0 |
| BI999373 | 202 | 230 | 431 | 0 |
| BI816504 | 182 | 190 | 371 | 0 |
| FC105887 | 142 | 387 | 528 | 0 |
| BI724602 | 170 | 230 | 399 | 0 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | Cre02.g117250.t1.3 | Cre02.g119700.t1.3 | g5804.t1 | ||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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