| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre02.g119700.t1.3 |
| Family | GH42 |
| Protein Properties | Length: 641 Molecular Weight: 68197.5 Isoelectric Point: 7.2935 |
| Chromosome | Chromosome/Scaffold: 2 Start: 6882987 End: 6889393 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH42 | 114 | 373 | 1e-22 |
| TLRQLQAARIRTVMFSISWAWLEPAQGQLRWGYLEDVVGSACSHTELKVTLIVDLMRAPDWLFVLHPGAAVLDAGGRNYSHLSWFHSAANEVALGSLRQV VEGLSAKYEGCISGVQPVYNNEYEAKYTQEFDSYQDYNAAALASYRSLMRTRVGGDLGRLNARWETQFSSWEEVAPPKLHAGAVMGPDESASFWDWQQFR VHHGASVFNQACAVVQAAGVRCFHHFPEFFSVLDAVYGAAMFKHIAASPHTDFLIMDSNF | |||
| Full Sequence |
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| Protein Sequence Length: 641 Download |
| MQSMRLLRPT SSWRGREGSA TLFSKRCCAL AALSVSCLIL ILALNQAPWS SSSSKSVASR 60 RSLLGFRSQK SQPLRAVRRK SVDDTFATIF HSELIDLFGL HKGGPEPVDQ LLVTLRQLQA 120 ARIRTVMFSI SWAWLEPAQG QLRWGYLEDV VGSACSHTEL KVTLIVDLMR APDWLFVLHP 180 GAAVLDAGGR NYSHLSWFHS AANEVALGSL RQVVEGLSAK YEGCISGVQP VYNNEYEAKY 240 TQEFDSYQDY NAAALASYRS LMRTRVGGDL GRLNARWETQ FSSWEEVAPP KLHAGAVMGP 300 DESASFWDWQ QFRVHHGASV FNQACAVVQA AGVRCFHHFP EFFSVLDAVY GAAMFKHIAA 360 SPHTDFLIMD SNFRTSTGAL MDPRKLRLYI AAAHAYGKPT YFEAAVERFA DVKLLQAGYA 420 HALLAGASNM GLTNWLGRIN ITDPQLAAAM HVEGGPEAAA AATAAAGAGS GVGCGAISEA 480 SEVVGVFIHL DSCGAWHGLQ WKSPTSKDPL HDFVDQLAER LIPTSATTAS ASSTPSTSSS 540 PSSGAGAAGA TAAVAAAGCG TDVAVYVDLG LFAQALAAGR LSRVVFVEPL VLAGGAEVAA 600 YVAARAALLR AEAAGLPVEV LRLPTGGARG LGLRVLEDLS * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 0.0005 | 115 | 326 | 223 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02449 | Glyco_hydro_42 | 1.0e-7 | 115 | 312 | 207 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001699637.1 | 0 | 305 | 639 | 16 | 290 | hypothetical protein CHLREDRAFT_141593 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001699638.1 | 0 | 121 | 500 | 7 | 371 | hypothetical protein CHLREDRAFT_141595 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001702441.1 | 0 | 87 | 455 | 77 | 423 | predicted protein [Chlamydomonas reinhardtii] |
| RefSeq | YP_723893.1 | 3e-23 | 123 | 485 | 621 | 986 | hypothetical protein Tery_4433 [Trichodesmium erythraeum IMS101] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1kwk_A | 0.000007 | 115 | 348 | 23 | 251 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 1kwg_A | 0.000007 | 115 | 348 | 23 | 251 | A Chain A, Crystal Structure Of Thermus Thermophilus A4 Beta-Galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| BI999373 | 223 | 280 | 502 | 0 |
| BI724308 | 208 | 151 | 358 | 0 |
| BI816504 | 182 | 238 | 419 | 0 |
| GE248828 | 221 | 224 | 442 | 0 |
| BM001619 | 133 | 238 | 370 | 2.99878e-43 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | Cre02.g117250.t1.3 | Cre02.g117250.t2.1 | g5804.t1 | ||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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