| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre03.g173100.t1.2 |
| Family | GH16 |
| Protein Properties | Length: 670 Molecular Weight: 71494.1 Isoelectric Point: 4.9906 |
| Chromosome | Chromosome/Scaffold: 3 Start: 4106546 End: 4113307 |
| Description | |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH16 | 59 | 332 | 1.1e-24 |
| NTAIWQYDNGDGSQYTTNSITQWGNGQLQCNSDASENVRVESGVAGADGGVLTINAVSKPVTCGITNSYGSSWTSGRLISRGAKPFMYSDPSTPIKIKAR MRVPLRASSQPLIALLPNTARTDCLGCGDFADGWCANGQMDLMNMMGGDGRVQQRIYSGGDNPIYWQGCSTLPATPVAASLASAGQAGGTSRWFTVSVVW GPTRISTFVDGVQTSSIDSSQWYTGWASKAALPYAPYDRAFYMVLTLGICGYGGCTAPSDTSTMTMQVDWIRAY | |||
| GH16 | 387 | 665 | 2e-36 |
| NCFNGLDTDRWGFESGDGSQYGITQWGTFENTCYFNTSKEVRAENIIDGGVSRSVLTINAWNTKASFACGTSRTTTRSARMLSRNKAAFRYLDANTPLLI EARMRVPLVASAWPAFWMLPDTPRTNCVGCSAYGDGWCNGGEIDIMETKNGDGIVSQTLHFGGGSGANYYVGCNYITRQLSPAYSTAGTAAGMSSWFTAQ LEWGAGYFKFMIDGVTVSYLSQSPSPTWYTGAVPTSTNPLAPFDKPFYLIANLAVCGNFVGQPCTPADSTFQIDWIKVW | |||
| Full Sequence |
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| Protein Sequence Length: 670 Download |
| MWLSTTGVVG RKSPPSPTPS PLRSPPSPSP PPSANQVLIW SEEFSPCAAG TPNCNNGLNT 60 AIWQYDNGDG SQYTTNSITQ WGNGQLQCNS DASENVRVES GVAGADGGVL TINAVSKPVT 120 CGITNSYGSS WTSGRLISRG AKPFMYSDPS TPIKIKARMR VPLRASSQPL IALLPNTART 180 DCLGCGDFAD GWCANGQMDL MNMMGGDGRV QQRIYSGGDN PIYWQGCSTL PATPVAASLA 240 SAGQAGGTSR WFTVSVVWGP TRISTFVDGV QTSSIDSSQW YTGWASKAAL PYAPYDRAFY 300 MVLTLGICGY GGCTAPSDTS TMTMQVDWIR AYDMTPASAP APSPPSPPSP PSPPSPPPPP 360 SPPSPPQPTG GPQLRWIEEF SPCTTDNCFN GLDTDRWGFE SGDGSQYGIT QWGTFENTCY 420 FNTSKEVRAE NIIDGGVSRS VLTINAWNTK ASFACGTSRT TTRSARMLSR NKAAFRYLDA 480 NTPLLIEARM RVPLVASAWP AFWMLPDTPR TNCVGCSAYG DGWCNGGEID IMETKNGDGI 540 VSQTLHFGGG SGANYYVGCN YITRQLSPAY STAGTAAGMS SWFTAQLEWG AGYFKFMIDG 600 VTVSYLSQSP SPTWYTGAVP TSTNPLAPFD KPFYLIANLA VCGNFVGQPC TPADSTFQID 660 WIKVWDLFP* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd02182 | GH16_Strep_laminarinase_like | 2.0e-7 | 38 | 332 | 312 | + Streptomyces laminarinase-like, member of glycosyl hydrolase family 16. Proteins similar to Streptomyces sioyaensis beta-1,3-glucanase (laminarinase) present in Actinomycetales as well as Peziomycotina. Laminarinases belong to glycosyl hydrolase family 16 and hydrolyze the glycosidic bond of the 1,3-beta-linked glucan, a major component of fungal and plant cell walls and the structural and storage polysaccharides (laminarin) of marine macro-algae. Members of the GH16 family have a conserved jelly roll fold with an active site channel. | ||
| cd02182 | GH16_Strep_laminarinase_like | 9.0e-18 | 393 | 665 | 292 | + Streptomyces laminarinase-like, member of glycosyl hydrolase family 16. Proteins similar to Streptomyces sioyaensis beta-1,3-glucanase (laminarinase) present in Actinomycetales as well as Peziomycotina. Laminarinases belong to glycosyl hydrolase family 16 and hydrolyze the glycosidic bond of the 1,3-beta-linked glucan, a major component of fungal and plant cell walls and the structural and storage polysaccharides (laminarin) of marine macro-algae. Members of the GH16 family have a conserved jelly roll fold with an active site channel. | ||
| cd08024 | GH16_CCF | 1.0e-20 | 463 | 665 | 253 | + Coelomic cytolytic factor, member of glycosyl hydrolase family 16. Subgroup of glucanases of unknown function that are related to beta-GRP (beta-1,3-glucan recognition protein), but contain active site residues. Beta-GRPs are one group of pattern recognition receptors (PRRs), also referred to as biosensor proteins, that complexes with pathogen-associated beta-1,3-glucans and then transduces signals necessary for activation of an appropriate innate immune response. Beta-GRPs are present in insects and lack all catalytic residues. This subgroup contains related proteins that still contain the active site and are widely distributed in eukaryotes. Their structures adopt a jelly roll fold with a deep active site channel harboring the catalytic residues, like those of other glycosyl hydrolase family 16 members. | ||
| cd08023 | GH16_laminarinase_like | 2.0e-26 | 40 | 332 | 295 | + Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans. | ||
| cd08023 | GH16_laminarinase_like | 1.0e-42 | 389 | 665 | 283 | + Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001703318.1 | 0 | 373 | 669 | 25 | 355 | hypothetical protein CHLREDRAFT_182825 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001703463.1 | 2e-28 | 173 | 336 | 1 | 166 | hypothetical protein CHLREDRAFT_188191 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001703463.1 | 0 | 504 | 669 | 1 | 166 | hypothetical protein CHLREDRAFT_188191 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001703464.1 | 0 | 1 | 494 | 12 | 436 | hypothetical protein CHLREDRAFT_168996 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001703464.1 | 0 | 374 | 669 | 49 | 329 | hypothetical protein CHLREDRAFT_168996 [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vy0_B | 7e-16 | 373 | 667 | 14 | 261 | A Chain A, The X-Ray Structure Of Endo-Beta-1,3-Glucanase From Pyrococcus Furiosus |
| PDB | 2vy0_B | 0.0000000000009 | 38 | 335 | 15 | 262 | A Chain A, The X-Ray Structure Of Endo-Beta-1,3-Glucanase From Pyrococcus Furiosus |
| PDB | 2vy0_A | 7e-16 | 373 | 667 | 14 | 261 | A Chain A, The X-Ray Structure Of Endo-Beta-1,3-Glucanase From Pyrococcus Furiosus |
| PDB | 2vy0_A | 0.0000000000009 | 38 | 335 | 15 | 262 | A Chain A, The X-Ray Structure Of Endo-Beta-1,3-Glucanase From Pyrococcus Furiosus |
| PDB | 4dfs_B | 0.00000000000001 | 373 | 666 | 19 | 263 | A Chain A, Structure Of The Catalytic Domain Of An Endo-1,3-Beta-Glucanase (Laminarinase) From Thermotoga Petrophila Rku-1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BI531129 | 171 | 500 | 670 | 0 |
| BI531129 | 174 | 167 | 334 | 1e-23 |
| BU650832 | 166 | 373 | 505 | 2e-16 |
| BU650832 | 163 | 40 | 174 | 0.000000000000007 |
| HO376168 | 183 | 486 | 665 | 0.00000000002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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