| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre03.g185250.t1.2 |
| Family | GT5 |
| Protein Properties | Length: 699 Molecular Weight: 77006.7 Isoelectric Point: 6.2127 |
| Chromosome | Chromosome/Scaffold: 3 Start: 5444965 End: 5450972 |
| Description | starch synthase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 208 | 691 | 0 |
| NVVMVGAECAPWSKTGGLGDVMAALPKALVRRGHRVMVVVPRYENYDNAWETGIRKIYSVFNSNQEVGYFHAFVDGVDYVFVDHPTFHGRGKNIYGGERQ EILFRCALLCKAALEAVWHVPCGGITYGDDNLCFIANDWHTALLPVYLQAHYRDYGKMTYARCAFVIHNMAHQGRGPFVESEHLELNEEYRERFRLYDPI GGEHMNVMKAGLECAHRLVAVSNGYAWECQTVEGGWGLHEVIKVNNWKLRGIVNGIDYKEWNPICDEFLTTDGYAHYDVDTLAEGKAKCKAALQKELGLP VDPDAPMLGFIGRLDYQKGVDLIRDNYDYIMGEKCQLVMLGSGRQDLEDALRDMENRNKNQCRGWVGFSNKMAHRITAAADILLMPSRFEPCGLNQLYAM AYGTVPIVHSVGGLRDTVKQYSPFENVGTGWVFERAEANKLRESINNALYTYRQFRDSFRGIQRRGMEQDLTWDNAASIYEEVL | |||
| Full Sequence |
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| Protein Sequence Length: 699 Download |
| MQTCMSPPGT SRSAALPQRT AAPNAARLGV TQNGLASPSG RGARCVPRAG DGRLSDVQRD 60 LLAEIEARRK NQAQLLEKLN RLAAETAART AATPASAAPP APPAAAMPAP APEVQVAVPM 120 SVPMPAMASV ASSPSSAWKS VPVSQPVRTA PPPPPPTPSV PIFELSLPLE SEMYIEPAAP 180 VAEAPEAEEE EPPAVEKPPP LAGPNVMNVV MVGAECAPWS KTGGLGDVMA ALPKALVRRG 240 HRVMVVVPRY ENYDNAWETG IRKIYSVFNS NQEVGYFHAF VDGVDYVFVD HPTFHGRGKN 300 IYGGERQEIL FRCALLCKAA LEAVWHVPCG GITYGDDNLC FIANDWHTAL LPVYLQAHYR 360 DYGKMTYARC AFVIHNMAHQ GRGPFVESEH LELNEEYRER FRLYDPIGGE HMNVMKAGLE 420 CAHRLVAVSN GYAWECQTVE GGWGLHEVIK VNNWKLRGIV NGIDYKEWNP ICDEFLTTDG 480 YAHYDVDTLA EGKAKCKAAL QKELGLPVDP DAPMLGFIGR LDYQKGVDLI RDNYDYIMGE 540 KCQLVMLGSG RQDLEDALRD MENRNKNQCR GWVGFSNKMA HRITAAADIL LMPSRFEPCG 600 LNQLYAMAYG TVPIVHSVGG LRDTVKQYSP FENVGTGWVF ERAEANKLRE SINNALYTYR 660 QFRDSFRGIQ RRGMEQDLTW DNAASIYEEV LVAAKYQW* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 1.0e-84 | 207 | 695 | 507 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 2.0e-135 | 207 | 689 | 493 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 1.0e-166 | 207 | 690 | 495 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 208 | 691 | 490 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 207 | 694 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC17970.2 | 0 | 161 | 698 | 39 | 576 | soluble starch synthase [Chlamydomonas reinhardtii] |
| GenBank | ABV25894.1 | 0 | 57 | 698 | 85 | 751 | starch synthase isoform II [Manihot esculenta] |
| GenBank | ACL98481.1 | 0 | 128 | 698 | 226 | 792 | starch synthase IIa precursor [Lotus japonicus] |
| RefSeq | NP_186767.1 | 0 | 90 | 698 | 206 | 792 | AtSS2 (starch synthase 2); transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_001691829.1 | 0 | 1 | 698 | 1 | 707 | soluble starch synthase II [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 207 | 693 | 10 | 510 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
| PDB | 3vue_A | 0 | 207 | 693 | 10 | 510 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 207 | 690 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 207 | 697 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 207 | 697 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO445868 | 438 | 262 | 699 | 0 |
| HO390058 | 459 | 242 | 699 | 0 |
| HO411612 | 417 | 284 | 699 | 0 |
| HO777841 | 309 | 391 | 699 | 0 |
| HO777841 | 184 | 201 | 384 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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