| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre06.g282000.t1.3 |
| Family | CBM53 |
| Protein Properties | Length: 1256 Molecular Weight: 137701 Isoelectric Point: 5.9846 |
| Chromosome | Chromosome/Scaffold: 6 Start: 5212616 End: 5224459 |
| Description | starch synthase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM53 | 344 | 435 | 1.2e-25 |
| APLQMYFNRNQSEKLRNRPHIVMQYGFNHWELQPEAGNSLDLFPAPTPKSDVTDFWTCRMQVPEETYELNFILHDKAGAYENNNGMDFTYPV | |||
| CBM53 | 696 | 785 | 6.6e-35 |
| GEEVTIYYNPRDTPLNGRQQLYLMGGWNRWTHKRSFGPVAMHPPEAGGEHWQATVMVPKDAYKMDFVFADVAGGDGTYDNRGGFDYHLPV | |||
| GT5 | 797 | 1249 | 0 |
| VAHIAVEMAPIAKVGGLGDVVTALGRAVKDQGHIVEVILPRYEFFLHSPVLQGQLKYETEFDWGGTRIYVTTAVVENLRVFFIEPKNGFFATPTVYGRYD DEVRFDFFCKAALEFLLKTGRQPDILHCHDWSTAHVAQSYWSDYHPYGLHKPRVIFTIHNLNYGQKKIGEAAHACQKFTTVSPTYAYEVGGAPIIAPHGH KFMGIRNGIDPELWSPEENIFLPVKYSSEDVVEGKKAARAALRQRLNLTGWNDKFIVAVVSRLTGQKGVPLIKHAAYRAIERGGQFVLLGSAPDPKVQAD FNALAQSMGGQDAAFCFKYDEPLSHLIYAAADMIVVPSMFEPCGLTQMIAMRYGTVPIVRHTGGLRDTVFDVDFDKERAAWELYGSSDWQRDGIDATNGF AFTGTDGGALDYAMNRAIDAWYNDRAWFHSLQRRIMEQDWSWNRPAIDYIELY | |||
| Full Sequence |
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| Protein Sequence Length: 1256 Download |
| MASSMGRALQ PGMSGAQRSV RKGANRIRGA QGPRTVPLLG LKALRKEDAE LLKEAESYMS 60 PEEHAELRRL LEENQRLRQV VTTSASQMSA QQLERFTAEY SNLAAAAEQA GLAVDQQLKQ 120 QITAPQAASA SRSSAASSTG RFEAAAGGSG YGYGRSSVSV LVAEPPSAPP AAASPPSYGA 180 SGSGGGGGGS PKGGATAFEV SSRDYAKDMA SLSVELDATI DDEEEEAPPR QVPEASTRTQ 240 PYAAAASRFE ALLSERRPAG ATVNGAQAQM LEAREKKAAS SSSSAGGVNG AAVNGAAAAD 300 EQAAKEAARA AAVAEVEGHR AVDVVAGREH WMIITVPEKP VAGAPLQMYF NRNQSEKLRN 360 RPHIVMQYGF NHWELQPEAG NSLDLFPAPT PKSDVTDFWT CRMQVPEETY ELNFILHDKA 420 GAYENNNGMD FTYPVEAGID YDTWVDTAAE RIVAKELARR EAEAKAAEEE RKAAEAAMEE 480 QAKEFGERKA AELKNNLGSL QEGGTAALLR NGVPVYKVTP ALPVAGGKAV VQYNRRGGSF 540 HAFPIPEGES VKLLYGFNGW QESGKAAMTR VPVPAKPAAG AEDEEWWEVE VDIPNIAVAM 600 NFVFNYYEHY DNNGKADYKA KVGLPAGTTL EAWAAGLGEQ YRVMELAKRR AERAEKEERQ 660 RRADEKKKLA QDLVKAVERR KVRHVLYTVP EVVEAGEEVT IYYNPRDTPL NGRQQLYLMG 720 GWNRWTHKRS FGPVAMHPPE AGGEHWQATV MVPKDAYKMD FVFADVAGGD GTYDNRGGFD 780 YHLPVEGSPV RESPLYVAHI AVEMAPIAKV GGLGDVVTAL GRAVKDQGHI VEVILPRYEF 840 FLHSPVLQGQ LKYETEFDWG GTRIYVTTAV VENLRVFFIE PKNGFFATPT VYGRYDDEVR 900 FDFFCKAALE FLLKTGRQPD ILHCHDWSTA HVAQSYWSDY HPYGLHKPRV IFTIHNLNYG 960 QKKIGEAAHA CQKFTTVSPT YAYEVGGAPI IAPHGHKFMG IRNGIDPELW SPEENIFLPV 1020 KYSSEDVVEG KKAARAALRQ RLNLTGWNDK FIVAVVSRLT GQKGVPLIKH AAYRAIERGG 1080 QFVLLGSAPD PKVQADFNAL AQSMGGQDAA FCFKYDEPLS HLIYAAADMI VVPSMFEPCG 1140 LTQMIAMRYG TVPIVRHTGG LRDTVFDVDF DKERAAWELY GSSDWQRDGI DATNGFAFTG 1200 TDGGALDYAM NRAIDAWYND RAWFHSLQRR IMEQDWSWNR PAIDYIELYF SALKA* 1260 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 1.0e-13 | 686 | 788 | 103 | + synthase/transferase | ||
| PRK00654 | glgA | 1.0e-137 | 795 | 1255 | 500 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-157 | 797 | 1251 | 497 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02316 | PLN02316 | 0 | 337 | 1254 | 936 | + synthase/transferase | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY42381.1 | 0 | 13 | 1255 | 1 | 1242 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| RefSeq | XP_001695327.1 | 0 | 1 | 274 | 1 | 187 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| RefSeq | XP_001695327.1 | 0 | 336 | 747 | 164 | 541 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| RefSeq | XP_001695327.1 | 0 | 809 | 1255 | 541 | 987 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 797 | 1250 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 797 | 1250 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 797 | 1250 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 797 | 1250 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 797 | 1250 | 3 | 474 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794758 | 575 | 683 | 1254 | 0 |
| HO417650 | 442 | 816 | 1254 | 0 |
| HO651392 | 426 | 832 | 1254 | 0 |
| BI995362 | 206 | 872 | 1077 | 0 |
| EC186236 | 236 | 781 | 1014 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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