| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre06.g282000.t2.1 |
| Family | CBM53 |
| Protein Properties | Length: 1220 Molecular Weight: 133974 Isoelectric Point: 5.9191 |
| Chromosome | Chromosome/Scaffold: 6 Start: 5212616 End: 5224459 |
| Description | starch synthase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM53 | 308 | 399 | 1.1e-25 |
| APLQMYFNRNQSEKLRNRPHIVMQYGFNHWELQPEAGNSLDLFPAPTPKSDVTDFWTCRMQVPEETYELNFILHDKAGAYENNNGMDFTYPV | |||
| CBM53 | 660 | 749 | 6.4e-35 |
| GEEVTIYYNPRDTPLNGRQQLYLMGGWNRWTHKRSFGPVAMHPPEAGGEHWQATVMVPKDAYKMDFVFADVAGGDGTYDNRGGFDYHLPV | |||
| GT5 | 761 | 1213 | 0 |
| VAHIAVEMAPIAKVGGLGDVVTALGRAVKDQGHIVEVILPRYEFFLHSPVLQGQLKYETEFDWGGTRIYVTTAVVENLRVFFIEPKNGFFATPTVYGRYD DEVRFDFFCKAALEFLLKTGRQPDILHCHDWSTAHVAQSYWSDYHPYGLHKPRVIFTIHNLNYGQKKIGEAAHACQKFTTVSPTYAYEVGGAPIIAPHGH KFMGIRNGIDPELWSPEENIFLPVKYSSEDVVEGKKAARAALRQRLNLTGWNDKFIVAVVSRLTGQKGVPLIKHAAYRAIERGGQFVLLGSAPDPKVQAD FNALAQSMGGQDAAFCFKYDEPLSHLIYAAADMIVVPSMFEPCGLTQMIAMRYGTVPIVRHTGGLRDTVFDVDFDKERAAWELYGSSDWQRDGIDATNGF AFTGTDGGALDYAMNRAIDAWYNDRAWFHSLQRRIMEQDWSWNRPAIDYIELY | |||
| Full Sequence |
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| Protein Sequence Length: 1220 Download |
| MASSMGRALQ PGMSGAQRSV RKGANRIRGA QGPRTVPLLG LKALRKEDAE LLKEAESYMS 60 PEEHAELRRL LEENQRLRQV VTTSASQMSA QQLERFTAEY SNLAAAAEQA GLAVDQQLKQ 120 QITAPQAASA SRSSAASSTG RFEAAAGGSG YGYGRSSVSV LVAEPPSAPP AAASPPSYGA 180 SGSGGGGGGS PKGGATAFEV SSRDYAKDMA SLSVELDATI DDEEEEAPPR QAQMLEAREK 240 KAASSSSSAG GVNGAAVNGA AAADEQAAKE AARAAAVAEV EGHRAVDVVA GREHWMIITV 300 PEKPVAGAPL QMYFNRNQSE KLRNRPHIVM QYGFNHWELQ PEAGNSLDLF PAPTPKSDVT 360 DFWTCRMQVP EETYELNFIL HDKAGAYENN NGMDFTYPVE AGIDYDTWVD TAAERIVAKE 420 LARREAEAKA AEEERKAAEA AMEEQAKEFG ERKAAELKNN LGSLQEGGTA ALLRNGVPVY 480 KVTPALPVAG GKAVVQYNRR GGSFHAFPIP EGESVKLLYG FNGWQESGKA AMTRVPVPAK 540 PAAGAEDEEW WEVEVDIPNI AVAMNFVFNY YEHYDNNGKA DYKAKVGLPA GTTLEAWAAG 600 LGEQYRVMEL AKRRAERAEK EERQRRADEK KKLAQDLVKA VERRKVRHVL YTVPEVVEAG 660 EEVTIYYNPR DTPLNGRQQL YLMGGWNRWT HKRSFGPVAM HPPEAGGEHW QATVMVPKDA 720 YKMDFVFADV AGGDGTYDNR GGFDYHLPVE GSPVRESPLY VAHIAVEMAP IAKVGGLGDV 780 VTALGRAVKD QGHIVEVILP RYEFFLHSPV LQGQLKYETE FDWGGTRIYV TTAVVENLRV 840 FFIEPKNGFF ATPTVYGRYD DEVRFDFFCK AALEFLLKTG RQPDILHCHD WSTAHVAQSY 900 WSDYHPYGLH KPRVIFTIHN LNYGQKKIGE AAHACQKFTT VSPTYAYEVG GAPIIAPHGH 960 KFMGIRNGID PELWSPEENI FLPVKYSSED VVEGKKAARA ALRQRLNLTG WNDKFIVAVV 1020 SRLTGQKGVP LIKHAAYRAI ERGGQFVLLG SAPDPKVQAD FNALAQSMGG QDAAFCFKYD 1080 EPLSHLIYAA ADMIVVPSMF EPCGLTQMIA MRYGTVPIVR HTGGLRDTVF DVDFDKERAA 1140 WELYGSSDWQ RDGIDATNGF AFTGTDGGAL DYAMNRAIDA WYNDRAWFHS LQRRIMEQDW 1200 SWNRPAIDYI ELYFSALKA* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02316 | PLN02316 | 1.0e-13 | 650 | 752 | 103 | + synthase/transferase |
| PRK00654 | glgA | 6.0e-138 | 759 | 1219 | 500 | + glycogen synthase; Provisional |
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-157 | 761 | 1215 | 497 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| PLN02316 | PLN02316 | 0 | 301 | 1218 | 936 | + synthase/transferase |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY42381.1 | 0 | 13 | 1219 | 1 | 1242 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| RefSeq | XP_001695327.1 | 0 | 1 | 711 | 1 | 541 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| RefSeq | XP_001695327.1 | 0 | 773 | 1219 | 541 | 987 | soluble starch synthase III [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 761 | 1214 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 761 | 1214 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 761 | 1214 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 761 | 1214 | 3 | 474 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 761 | 1214 | 3 | 474 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO794758 | 575 | 647 | 1218 | 0 |
| HO417650 | 442 | 780 | 1218 | 0 |
| HO651392 | 426 | 796 | 1218 | 0 |
| BI995362 | 206 | 836 | 1041 | 0 |
| EC186236 | 236 | 745 | 978 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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