y
Basic Information | |
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Species | Chlamydomonas reinhardtii |
Cazyme ID | Cre06.g307150.t1.3 |
Family | GH14 |
Protein Properties | Length: 595 Molecular Weight: 66678.3 Isoelectric Point: 7.2964 |
Chromosome | Chromosome/Scaffold: 6 Start: 8425366 End: 8429363 |
Description | chloroplast beta-amylase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 138 | 583 | 0 |
YVMLPLDTVWVVERDGKRISVLKKERSLDIALHTLKQAGVEGVMVDVWWGIVERAGPRQYDFSAYKRLFYKVAAAGLKVQAVMSFHAAGGNVGDTCKIPL PKWVLEIGERNPDIFYTDKAGHRNRECLSLGCDEVPLFWGRTPVLMYRDFINAFADKFQHLFGTVITEVTVGLGPAGELRYPSYPEGDGRWRFPGVGEFQ CYDKFMLESLRRTAEAAGHAEWGLSGPHDAGHYNSSSWETGFFVSQNGSWNTAYGHFFLSWYSNMLLEHADRVLSSAAEVLNKHGRPRVFNSMRDASNGH VIYEFTPACKMGIKLAGVHWWFKSRAHAAELTAGYYNTRDRDGYLPFMAMLRRHDASLSFTCVEMRDCEHPPEGRCSPQALLQQVIEAAEKYGVPLSGEN ALQRYDDYAFERIAESAFGRNARAGRLTQVTFLRMGDLMFDNWDAF |
Full Sequence |
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Protein Sequence Length: 595 Download |
MPTSLPQCPS APRSVQPLRS ALLAAQRLSQ CRGSRSQRGS GACHSQGRQV THPTAHPRTS 60 RTLDDDSGFA SFAPEPIVTT PGASAFSEVE DDLQIHRLLR ETGQHIKIPM IDEDRFDTQY 120 PESQAEEPSS SGSGCPVYVM LPLDTVWVVE RDGKRISVLK KERSLDIALH TLKQAGVEGV 180 MVDVWWGIVE RAGPRQYDFS AYKRLFYKVA AAGLKVQAVM SFHAAGGNVG DTCKIPLPKW 240 VLEIGERNPD IFYTDKAGHR NRECLSLGCD EVPLFWGRTP VLMYRDFINA FADKFQHLFG 300 TVITEVTVGL GPAGELRYPS YPEGDGRWRF PGVGEFQCYD KFMLESLRRT AEAAGHAEWG 360 LSGPHDAGHY NSSSWETGFF VSQNGSWNTA YGHFFLSWYS NMLLEHADRV LSSAAEVLNK 420 HGRPRVFNSM RDASNGHVIY EFTPACKMGI KLAGVHWWFK SRAHAAELTA GYYNTRDRDG 480 YLPFMAMLRR HDASLSFTCV EMRDCEHPPE GRCSPQALLQ QVIEAAEKYG VPLSGENALQ 540 RYDDYAFERI AESAFGRNAR AGRLTQVTFL RMGDLMFDNW DAFSRFLNRM RNKA* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 3.0e-133 | 118 | 594 | 488 | + beta-amylase | ||
PLN02161 | PLN02161 | 2.0e-136 | 136 | 590 | 457 | + beta-amylase | ||
PLN02801 | PLN02801 | 2.0e-168 | 136 | 590 | 463 | + beta-amylase | ||
PLN00197 | PLN00197 | 1.0e-176 | 118 | 591 | 479 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 0 | 56 | 590 | 538 | + beta-amylase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAY88485.1 | 0 | 117 | 590 | 76 | 519 | hypothetical protein OsI_09956 [Oryza sativa Indica Group] |
RefSeq | NP_001048926.1 | 0 | 117 | 590 | 77 | 520 | Os03g0141200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_001691372.1 | 0 | 1 | 594 | 1 | 594 | beta-amylase [Chlamydomonas reinhardtii] |
RefSeq | XP_002464915.1 | 0 | 134 | 592 | 91 | 515 | hypothetical protein SORBIDRAFT_01g028700 [Sorghum bicolor] |
RefSeq | XP_002518196.1 | 0 | 136 | 591 | 108 | 538 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 131 | 590 | 2 | 435 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1q6g_A | 0 | 135 | 590 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1wdp_A | 0 | 135 | 590 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1q6c_A | 0 | 135 | 590 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 135 | 590 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FC100384 | 271 | 137 | 407 | 0 |
BE337108 | 222 | 212 | 433 | 0 |
BU103692 | 459 | 134 | 590 | 0 |
BF863931 | 211 | 315 | 525 | 0 |
HO624546 | 437 | 160 | 591 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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