| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre07.g317250.t1.3 |
| Family | GH18 |
| Protein Properties | Length: 1011 Molecular Weight: 105483 Isoelectric Point: 6.2669 |
| Chromosome | Chromosome/Scaffold: 7 Start: 659706 End: 666030 |
| Description | Glycosyl hydrolase family protein with chitinase insertion domain |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH18 | 558 | 999 | 0 |
| YKVVGYLENWRWYSNPNTQPPSLTAHTPKLTHINYAFASVSYSPALDSYYLDFTDTWADIGACLTGSCPSTCIALNATCPGSNLALAPTTKTASPAACPT GCYNPSGSSGYPRRCNTVAPDMSTPLRACGHYAYVQQFIKNSAPSVRVLISVGGWYDSNLFSLAALPKYRTRFVDSVFDFLDTFGFDGVDIDWEYPGFEH GGQPPYGMTDTGSADDVRDCTAAGACTYTGRTADGSNFVGLLNELRSRIPARRSQRGEPYLVTMAGPGGSDKLNKFDAAAVCSALDWVNIMTYDLAGPWD SVTGHQSALAGSGALSISNIVQQYISRGCPASKLVVGVPFYGRTFKGVAPGANTALPGLGQPFSVSLTNQLGATEGMPTQINVAAKGFRTYFDTASNASY AYDSASQTFITYDNEAAVSAKADYVKRLGLGGVMAWALGQET | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1011 Download |
| MRRWNCWALA AFVAMTCFTT CHGHGFLAEP LSRNMYSRIY DANPDYTPNQ LSAGGVGAVS 60 GSFTRLWPNG LYSVCGNAYN DPEPKRWMQP RPVQATYTEG SVIEISVSIT ADHKGRFAFR 120 LCPTTAVTEA CLDGHWLTRA DTVRPGDRYW YLTAKSDGSA RVYTRTTSAF TAPTYGLRYR 180 LPPGVTCDNC VLQWWYATGN SCALPCVEED PDWNPAAGPT SCDTLNQGIC GTSTSVYPEE 240 FWNCADIAIV AANGTSGTTS SPSPSPSPVV AATPSPSPSP SPSPSPVAAT PSPSPAASGP 300 CSTTGYCSGK ADGLYANPCD GTCTTYMSCS HGITYVQSCG GGLVFNPTYN YCDWAYNYRC 360 PAVSGVNSSP SPAPSPSPVA TPSPSPSPSP SPSPSPSPSP SPRPSPSPSA TSSPTPSPSP 420 AASGPCSTTG YCSGKADGLY ANPCDGTCTT YMSCSHGITY VQSCGGGLVF NPTYKYCDWA 480 YNYRCPAVSG GTSSPSPAPS ATPSPSATPS PSATPSPSAT PSLSPAATPS PSPSPSATPS 540 PSPSPSGNTS GPSGTSGYKV VGYLENWRWY SNPNTQPPSL TAHTPKLTHI NYAFASVSYS 600 PALDSYYLDF TDTWADIGAC LTGSCPSTCI ALNATCPGSN LALAPTTKTA SPAACPTGCY 660 NPSGSSGYPR RCNTVAPDMS TPLRACGHYA YVQQFIKNSA PSVRVLISVG GWYDSNLFSL 720 AALPKYRTRF VDSVFDFLDT FGFDGVDIDW EYPGFEHGGQ PPYGMTDTGS ADDVRDCTAA 780 GACTYTGRTA DGSNFVGLLN ELRSRIPARR SQRGEPYLVT MAGPGGSDKL NKFDAAAVCS 840 ALDWVNIMTY DLAGPWDSVT GHQSALAGSG ALSISNIVQQ YISRGCPASK LVVGVPFYGR 900 TFKGVAPGAN TALPGLGQPF SVSLTNQLGA TEGMPTQINV AAKGFRTYFD TASNASYAYD 960 SASQTFITYD NEAAVSAKAD YVKRLGLGGV MAWALGQETA TLWSALTSGL * 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00636 | Glyco_18 | 2.0e-5 | 559 | 618 | 60 | + Glyco_18 domain. | ||
| pfam00704 | Glyco_hydro_18 | 3.0e-59 | 687 | 997 | 312 | + Glycosyl hydrolases family 18. | ||
| COG3325 | ChiA | 3.0e-62 | 558 | 1010 | 479 | + Chitinase [Carbohydrate transport and metabolism] | ||
| smart00636 | Glyco_18 | 3.0e-71 | 687 | 997 | 321 | + Glyco_18 domain. | ||
| cd06548 | GH18_chitinase | 3.0e-72 | 560 | 997 | 446 | + The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001700997.1 | 0 | 727 | 1010 | 1 | 276 | hypothetical protein CHLREDRAFT_113089 [Chlamydomonas reinhardtii] |
| RefSeq | ZP_04231516.1 | 0 | 555 | 995 | 42 | 453 | Chitinase C [Bacillus cereus Rock3-29] |
| RefSeq | ZP_04237287.1 | 0 | 555 | 995 | 42 | 453 | Chitinase C [Bacillus cereus Rock3-28] |
| RefSeq | ZP_04248575.1 | 0 | 555 | 995 | 42 | 453 | Chitinase C [Bacillus cereus Rock1-3] |
| RefSeq | ZP_04321550.1 | 0 | 553 | 995 | 48 | 461 | Chitinase C [Bacillus cereus m1293] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1itx_A | 1.99965e-42 | 696 | 1010 | 116 | 419 | A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 |
| PDB | 1h0i_B | 1.99993e-41 | 696 | 998 | 81 | 408 | A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 |
| PDB | 1h0i_A | 1.99993e-41 | 696 | 998 | 81 | 408 | A Chain A, Catalytic Domain Of Chitinase A1 From Bacillus Circulans Wl-12 |
| PDB | 1h0g_B | 1.99993e-41 | 696 | 998 | 81 | 408 | A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys |
| PDB | 1h0g_A | 1.99993e-41 | 696 | 998 | 81 | 408 | A Chain A, Complex Of A Chitinase With The Natural Product Cyclopentapeptide Argadin From Clonostachys |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| chitin degradation II | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12623 | EC-3.2.1.14 | chitinase |
| chitin degradation II | RXN-12624 | EC-3.2.1.14 | chitinase |
| chitin degradation III (carnivorous plants) | 3.2.1.14-RXN | EC-3.2.1.14 | chitinase |
