| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre10.g422450.t1.2 |
| Family | GT8 |
| Protein Properties | Length: 554 Molecular Weight: 58806.3 Isoelectric Point: 9.6571 |
| Chromosome | Chromosome/Scaffold: 10 Start: 700952 End: 706603 |
| Description | plant glycogenin-like starch initiation protein 6 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT8 | 26 | 265 | 8.7e-36 |
| SAPARAPEAYATLVYGEDFVLGARVLGQSLREAGTTRDMVALTTGSLSAASELTLASDGWRVIHVAPVANPGKGPQPGLGYPARFAYVYTKLYIFKMTEY KKIVFIDADVLVLRNMDSIFKCPGFCAALRHSERFNTGVMSLVPSQELYDDMMAKVASMPSYTGGDQGFLNSYFSGFAHAPLFDPDTPYTSDQYKYMRLP TTYNADVGLFVVGSNRWMLPRDTLYVIHFTLGPFKPWVWW | |||
| Full Sequence |
|---|
| Protein Sequence Length: 554 Download |
| MKLLQSLLAV LLISFGFATA TPTVKSAPAR APEAYATLVY GEDFVLGARV LGQSLREAGT 60 TRDMVALTTG SLSAASELTL ASDGWRVIHV APVANPGKGP QPGLGYPARF AYVYTKLYIF 120 KMTEYKKIVF IDADVLVLRN MDSIFKCPGF CAALRHSERF NTGVMSLVPS QELYDDMMAK 180 VASMPSYTGG DQGFLNSYFS GFAHAPLFDP DTPYTSDQYK YMRLPTTYNA DVGLFVVGSN 240 RWMLPRDTLY VIHFTLGPFK PWVWWSGWLV RENPAWEAVR GRLPPDSRGL KAGTTPRQLF 300 YERWMIALPV AAFAAIAYLA WASLAPAVKE GLSGLTNILR RRGGAGGGYG LLGGSGGAGG 360 AGAGGAGSHG VSGADVVLKM SPAGNASAGD VFPRFFMAGA LAAGYGCVVL ATIITILMVP 420 YEVEPLYGWT LSYLWGFLLL GTCYGLFLRA CFAAGRRAGL HPAVTPPKGW VGAPPVPRSE 480 TAASAAFLVA SLLLAPWLGR LLHINSFVGT IVATVFIGLG VIVVATVQFA FLPAQWYIAG 540 RMAAAAGAGA RAS* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00176 | PLN00176 | 2.0e-8 | 34 | 262 | 272 | + galactinol synthase | ||
| cd00505 | Glyco_transf_8 | 8.0e-11 | 34 | 263 | 263 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
| cd06914 | GT8_GNT1 | 5.0e-11 | 114 | 263 | 166 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
| pfam01501 | Glyco_transf_8 | 1.0e-20 | 37 | 266 | 265 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
| cd02537 | GT8_Glycogenin | 3.0e-68 | 33 | 268 | 239 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABZ89190.1 | 0 | 26 | 298 | 33 | 302 | hypothetical protein 46C02.16 [Coffea canephora] |
| EMBL | CAH67224.1 | 0 | 33 | 310 | 34 | 303 | OSIGBa0145M07.6 [Oryza sativa (indica cultivar-group)] |
| GenBank | EEC77645.1 | 0 | 33 | 461 | 34 | 441 | hypothetical protein OsI_16652 [Oryza sativa Indica Group] |
| RefSeq | NP_001146086.1 | 0 | 33 | 461 | 30 | 435 | hypothetical protein LOC100279618 [Zea mays] |
| RefSeq | NP_197349.2 | 0 | 1 | 461 | 1 | 437 | PGSIP6 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6); transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u2w_B | 3e-23 | 33 | 262 | 5 | 221 | A Chain A, Structure Of The Streptococcus Pyogenes Family Gh38 Alpha- Mannosidase |
| PDB | 3u2w_A | 3e-23 | 33 | 262 | 5 | 221 | A Chain A, Structure Of The Streptococcus Pyogenes Family Gh38 Alpha- Mannosidase |
| PDB | 3qvb_A | 3e-23 | 33 | 262 | 5 | 221 | A Chain A, Structure Of The Streptococcus Pyogenes Family Gh38 Alpha- Mannosidase |
| PDB | 3q4s_A | 3e-23 | 33 | 262 | 5 | 221 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1), Apo Form |
| PDB | 3rmw_A | 9e-23 | 33 | 262 | 5 | 221 | A Chain A, Crystal Structure Of Human Glycogenin-1 (Gyg1) T83m Mutant Complexed With Manganese And Udp-Glucose |
