| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre10.g458350.t1.3 |
| Family | GH18 |
| Protein Properties | Length: 2500 Molecular Weight: 930929 Isoelectric Point: 4.5208 |
| Chromosome | Chromosome/Scaffold: 10 Start: 5373737 End: 5433028 |
| Description | Glycosyl hydrolase family protein with chitinase insertion domain |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH18 | 940 | 1276 | 6.9e-32 |
| SGASHVIFSRLRPNADGLNVTLAAPRDRPVLANLARSLRRLSPGVKVLAAIGGEDSGSGSSGPEDAAAFARLVRNPQSIERFAAAAAAFVQSYGLDGLEL NWPGLTEEQVPGYASLVQALSFSLRRLSTNTNTSAASGAPLLLALALSPASSPQLALPWYLLAPYVDLFNFQAFDMGGDEVLGATPYIETPLYDCTEAYG LSVNSLVDQLLAAGVPPQRLNLIASALARTYVLDGDGAVGGPGSPGPCLGAEGLLDQAELRLLLPAGGSAGSGSSSSGSAGGARLAPAAAAVYSPYSYGG GSQWAHWEDAYTLGSKACFARIHCLGGLGLWDADGDS | |||
| Full Sequence |
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| Protein Sequence Length: 2500 Download |
| MIRYAGAIMA ARSNAVLVIL LTLAPFAACI DVKLVNDFAP ADAAVVYEGR VEVTSPTSGQ 60 ICSSLFDDRD ASVICRQLGL PTASATAVFE AWRVYGKEGP WAGGAAASDA DILAYLNTNY 120 PPITLARLRC RGRETSLDSC TLDTAESGGD GAAAVALCNR AQAVGVRCYP ADYTLRLVNN 180 GNSGFGVTEG RVEVWLYHGW GPVGSKSFDT SDAAVVCRQL GLPSGGATVL TGAAAAARYG 240 SPTASTATVL IDGLQCTGDE ASVAACDRSV SAADLAAAAS AAAAAAAAGA APRPAFVGVQ 300 CREPEYAARL VDGEHPSEGR LELYKGGMWG SVCASGIDTS ALLTACRQLG FFTSPDLGPT 360 VQTLSASGLD VPAATPPLVA GGLASCPAGA TSLSQCRASL PNGAAGDPTA TCANGSAPSD 420 SAAVLRCYAV PPLLASDVEP RALCADPWST AAGLAPSAAG ATALLVGEFD DLSAGAATRA 480 QDALLLSYGA DGRLLGHAAF GRPWASSFGS EADIDFGVLP AAPGALLLAD VTGDGRDDLV 540 ALTSDAVLVA VASGARSFAP LATWLLPNGA GGAASGAGSI SSSSTATTAP AATGSGLGGA 600 DTIDTSNTTS RSYLFIDVTG DNAADMVVFD ADTLRVSYYP SNMVNELQDD TDGGGITWFE 660 LSTVPARCVS LGEDCFFVAG DFNGDGLNDW ALVYRDRFTA GPASSASSTA AASGPQEVFL 720 TLVGTSPPSP LTWHLAAPAS FPRGACSSPW AVLLGRFSGG GADSEPQVAC ASSADAHVYV 780 AGYERAWGVL PGPPTLIAVR DVDLDGRDDL LVLTADGSYY LTSTGSGFRP PVSTAAYGSA 840 ATGSVPLAAA LALGQTDQTS AKVLAAPAPI AAAPVEARCG APSRLVVYYS NRRLDPTPGC 900 SSAGSSTTAT AGSSSSSSSS AAAATADQQQ QQVLQRLAGS GASHVIFSRL RPNADGLNVT 960 LAAPRDRPVL ANLARSLRRL SPGVKVLAAI GGEDSGSGSS GPEDAAAFAR LVRNPQSIER 1020 FAAAAAAFVQ SYGLDGLELN WPGLTEEQVP GYASLVQALS FSLRRLSTNT NTSAASGAPL 1080 LLALALSPAS SPQLALPWYL LAPYVDLFNF QAFDMGGDEV LGATPYIETP LYDCTEAYGL 1140 SVNSLVDQLL AAGVPPQRLN LIASALARTY VLDGDGAVGG PGSPGPCLGA EGLLDQAELR 1200 LLLPAGGSAG SGSSSSGSAG GARLAPAAAA VYSPYSYGGG SQWAHWEDAY TLGSKACFAR 1260 IHCLGGLGLW DADGDSFGQL LGALGSAAAA DPASCVDFTP PSCPNTASAS GTTDLGAPDL 1320 VATLGDTEYS LFQVRKTFDD ARAHCAAFGD GGDLAAVTSA AEAGAVYGLL AGWAASGQLG 1380 AEDLWSGRDV AMWLGGSDAA QEGRFVWLSR AGADLTYTAW AAGQPDGRFG GEDCLGAVVR 1440 LAGGSGAGLR QVVSPAAQWY DLGCTTALPF VCARPRSVTE GSGLTAAATA AAGGYRRVSA 1500 GPTASLLVFP PSAAAGSDGG QQPMMMTMAE GQKLCRSLGA ELPSLTDPLV RQQLLGSFSS 1560 GGSYGTRAGL PPYIWLGLRS YGDGELYWSD GSQTSDGLLN AWEQGEFGEA ACAVLVPGPQ 1620 SANVTLQIDG LYSFWNESVA LGAQRVSPPP PPPPNTPPPP TPPPLAPFGP DRPAGLPPQP 1680 EPAGLRPALP PPGLPVAPPD APEADQIAAG FAPPPQAPPL AGVPPVVDLL LSPGVWSLSC 1740 LELAPVVCLD GPPEVSLTPD FYCLSRPSGP GGAPLPMPVP GLLLPPGDSA GGSSNPLSVR 1800 SELECAAACM VAQRCVFFSY LPGYPSSTGS SSSSSSSSSS NLINACFLLQ EPWSTAAGAT 1860 VPQRPGSSSS GSGSSSSGSN AYSYTTADRV CFRSGAAFMG DVITVADIAA VAASASNASS 1920 TSNSSTDAAA SGTGSSSTAA GASLAPVTAI SPMFGFPAPT PVPGLDPPAP RAAPWRLSPG 1980 VPPQESGYGG YGGGGVYGSH GGYGGYGGTT VTEYGEQHLA FSLRCALDSA LPVLSSVSLV 2040 LDAAGYIADV GTSCGGGTAS GSGGGSSSVS SNSTTGDDLG PAASTDMLKS AEQRAVLPPL 2100 PAVTASIYRE SCGPSGAVVG ISGTFDAAGI CTAVLSCASG ATIPLLPSSS AGDGSSADAA 2160 AGDGRNLPRP CAAVGGAFAF SCPSGMVAYG LQGTFASAYG ASSAISLATL QLLCATAPAL 2220 PTAQQAAPPA APLPPRPPVP LLALPLPAPT GGNGSATSGR RLHEEGDPVI IGSTGLVGSI 2280 QGSGSGNGGS GSGHNRAIGV QLPKPRRTLL QQADDNTSMP SPPSPPPPPP PSPPPRPPPP 2340 PRPPRPSPPV PPPQGSPPVP PPSPKPPTPP SPPPVPPAPP SPKPPSPLPP QPSPTPPTPP 2400 PAPYRPDAPP SPPNPPPRPP RPPAPRPPTS SPPPVPAPPS PPAPVASGVP ACNGCSPVFG 2460 SLGNDMGAAP AVATVCPPGY LISRLVFSSA RSGSSSSGDA |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00059 | Lectin_C | 0.0007 | 4654 | 4776 | 126 | + Lectin C-type domain. This family includes both long and short form C-type | ||
| pfam00059 | Lectin_C | 5.0e-8 | 3095 | 3219 | 125 | + Lectin C-type domain. This family includes both long and short form C-type | ||
| pfam00059 | Lectin_C | 1.0e-10 | 1335 | 1472 | 138 | + Lectin C-type domain. This family includes both long and short form C-type | ||
| pfam00059 | Lectin_C | 1.0e-12 | 5715 | 5842 | 128 | + Lectin C-type domain. This family includes both long and short form C-type | ||
| pfam00059 | Lectin_C | 1.0e-16 | 5539 | 5664 | 127 | + Lectin C-type domain. This family includes both long and short form C-type | ||
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001698388.1 | 0 | 114 | 858 | 44 | 757 | hypothetical protein CHLREDRAFT_168182 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001698388.1 | 0 | 972 | 1846 | 757 | 1549 | hypothetical protein CHLREDRAFT_168182 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001698388.1 | 0 | 2563 | 2965 | 1601 | 2003 | hypothetical protein CHLREDRAFT_168182 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001698388.1 | 0 | 3025 | 6758 | 2004 | 5577 | hypothetical protein CHLREDRAFT_168182 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001698388.1 | 0 | 6827 | 8984 | 5577 | 7601 | hypothetical protein CHLREDRAFT_168182 [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1hkk_A | 0.00000000000002 | 977 | 1277 | 62 | 344 | A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin |
| PDB | 1guv_A | 0.00000000000002 | 977 | 1277 | 62 | 344 | A Chain A, Structure Of Human Chitotriosidase |
| PDB | 1lq0_A | 0.00000000000002 | 977 | 1277 | 62 | 344 | A Chain A, Structure Of Human Chitotriosidase |
| PDB | 1lg2_A | 0.00000000000002 | 977 | 1277 | 62 | 344 | A Chain A, Structure Of Human Chitotriosidase |
| PDB | 1lg1_A | 0.00000000000002 | 977 | 1277 | 62 | 344 | A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose |
| Transmembrane Domains | |||||
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| Start | End | ||||
| 13 | 35 | ||||
| 9002 | 9024 | ||||
| Signal Peptide | |||||
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| Cleavage Site | |||||
| 29 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| AV396964 | 105 | 8155 | 8259 | 1.99965e-42 |
| AV645111 | 158 | 8350 | 8503 | 3e-38 |
| BI999053 | 62 | 479 | 540 | 0.000000000002 |
| FD814124 | 187 | 48 | 221 | 0.00000000002 |
| FD814124 | 63 | 297 | 351 | 0.003 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | Cre01.g002800.t1.3 | g5228.t2 | g5228.t1 | Cre10.g451600.t3.1 | Cre10.g451600.t2.1 |
| Cre10.g458350.t3.1 | Cre10.g458350.t2.1 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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