| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre10.g458350.t2.1 |
| Family | GH18 |
| Protein Properties | Length: 2500 Molecular Weight: 931409 Isoelectric Point: 4.5239 |
| Chromosome | Chromosome/Scaffold: 10 Start: 5373737 End: 5433028 |
| Description | Glycosyl hydrolase family protein with chitinase insertion domain |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH18 | 946 | 1282 | 6.9e-32 |
| SGASHVIFSRLRPNADGLNVTLAAPRDRPVLANLARSLRRLSPGVKVLAAIGGEDSGSGSSGPEDAAAFARLVRNPQSIERFAAAAAAFVQSYGLDGLEL NWPGLTEEQVPGYASLVQALSFSLRRLSTNTNTSAASGAPLLLALALSPASSPQLALPWYLLAPYVDLFNFQAFDMGGDEVLGATPYIETPLYDCTEAYG LSVNSLVDQLLAAGVPPQRLNLIASALARTYVLDGDGAVGGPGSPGPCLGAEGLLDQAELRLLLPAGGSAGSGSSSSGSAGGARLAPAAAAVYSPYSYGG GSQWAHWEDAYTLGSKACFARIHCLGGLGLWDADGDS | |||
| Full Sequence |
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| Protein Sequence Length: 2500 Download |
| MIRYAGAIMA ARSNAVLVIL LTLAPFAACI DVKLVNDFAP ADAAVVYEGR VEVTSPTSGQ 60 ICSSLFDDRD ASVICRQLGL PTASATAVFE AWRVYGKEGP WAGGAAASDA DILAYLNTNY 120 PPITLARLRC RGRETSLDSC TLDTAESGGD GAAAVALCNR AQAVGVRCYP ADYTLRLVNN 180 GNSGFGVTEG RVEVWLYHGW GPVGSKSFDT SDAAVVCRQL GLPSGGATVL TGAAAAARYG 240 SPTASTATVL IDGLQCTGDE ASVAACDRSV SAADLAAAAS AAAAAAAAGA APRPAFVGVQ 300 CREPEYAARL VDGEHPSEGR LELYKGGMWG SVCASGIDTS ALLTACRQLG FFTSPDLGPT 360 VQTLSASGLD VPAATPPLVA GGLASCPAGA TSLSQCRASL PNGAAGDPTA TCANGSAPSD 420 SAAVLRCYAV PPLLASDVEP RALCADPWST AAGLAPSAAG ATALLVGEFD DLSAGAATRA 480 QDALLLSYGA DGRLLGHAAF GRPWASSFGS EADIDFGVLP AAPGALLLAD VTGDGRDDLV 540 ALTSDAVLAN AQLHVAVASG ARSFAPLATW LLPNGAGGAA SGAGSISSSS TATTAPAATG 600 SGLGGADTID TSNTTSRSYL FIDVTGDNAA DMVVFDADTL RVSYYPSNMV NELQDDTDGG 660 GITWFELSTV PARCVSLGED CFFVAGDFNG DGLNDWALVY RDRFTAGPAS SASSTAAASG 720 PQEVFLTLVG TSPPSPLTWH LAAPASFPRG ACSSPWAVLL GRFSGGGADS EPQVACASSA 780 DAHVYVAGYE RAWGVLPGPP TLIAVRDVDL DGRDDLLVLT ADGSYYLTST GSGFRPPVST 840 AAYGSAATGS VPLAAALALG QTDQTSAKVL AAPAPIAAAP VEARCGAPSR LVVYYSNRRL 900 DPTPGCSSAG SSTTATAGSS SSSSSSAAAA TADQQQQQVL QRLAGSGASH VIFSRLRPNA 960 DGLNVTLAAP RDRPVLANLA RSLRRLSPGV KVLAAIGGED SGSGSSGPED AAAFARLVRN 1020 PQSIERFAAA AAAFVQSYGL DGLELNWPGL TEEQVPGYAS LVQALSFSLR RLSTNTNTSA 1080 ASGAPLLLAL ALSPASSPQL ALPWYLLAPY VDLFNFQAFD MGGDEVLGAT PYIETPLYDC 1140 TEAYGLSVNS LVDQLLAAGV PPQRLNLIAS ALARTYVLDG DGAVGGPGSP GPCLGAEGLL 1200 DQAELRLLLP AGGSAGSGSS SSGSAGGARL APAAAAVYSP YSYGGGSQWA HWEDAYTLGS 1260 KACFARIHCL GGLGLWDADG DSFGQLLGAL GSAAAADPAS CVDFTPPSCP NTASASGTTD 1320 LGAPDLVATL GDTEYSLFQV RKTFDDARAH CAAFGDGGDL AAVTSAAEAG AVYGLLAGWA 1380 ASGQLGAEDL WSGRDVAMWL GGSDAAQEGR FVWLSRAGAD LTYTAWAAGQ PDGRFGGEDC 1440 LGAVVRLAGG SGAGLRQVVS PAAQWYDLGC TTALPFVCAR PRSVTEGSGL TAAATAAAGG 1500 YRRVSAGPTA SLLVFPPSAA AGSDGGQQPM MMTMAEGQKL CRSLGAELPS LTDPLVRQQL 1560 LGSFSSGGSY GTRAGLPPYI WLGLRSYGDG ELYWSDGSQT SDGLLNAWEQ GEFGEAACAV 1620 LVPGPQSANV TLQIDGLYSF WNESVALGAQ RVSPPPPPPP NTPPPPTPPP LAPFGPDRPA 1680 GLPPQPEPAG LRPALPPPGL PVAPPDAPEA DQIAAGFAPP PQAPPLAGVP PVVDLLLSPG 1740 VWSLSCLELA PVVCLDGPPE VSLTPDFYCL SRPSGPGGAP LPMPVPGLLL PPGDSAGGSS 1800 NPLSVRSELE CAAACMVAQR CVFFSYLPGY PSSTGSSSSS SSSSSSNLIN ACFLLQEPWS 1860 TAAGATVPQR PGSSSSGSGS SSSGSNAYSY TTADRVCFRS GAAFMGDVIT VADIAAVAAS 1920 ASNASSTSNS STDAAASGTG SSSTAAGASL APVTAISPMF GFPAPTPVPG LDPPAPRAAP 1980 WRLSPGVPPQ ESGYGGYGGG GVYGSHGGYG GYGGTTVTEY GEQHLAFSLR CALDSALPVL 2040 SSVSLVLDAA GYIADVGTSC GGGTASGSGG GSSSVSSNST TGDDLGPAAS TDMLKSAEQR 2100 AVLPPLPAVT ASIYRESCGP SGAVVGISGT FDAAGICTAV LSCASGATIP LLPSSSAGDG 2160 SSADAAAGDG RNLPRPCAAV GGAFAFSCPS GMVAYGLQGT FASAYGASSA ISLATLQLLC 2220 ATAPALPTAQ QAAPPAAPLP PRPPVPLLAL PLPAPTGGNG SATSGRRLHE EGDPVIIGST 2280 GLVGSIQGSG SGNGGSGSGH NRAIGVQLPK PRRTLLQQAD DNTSMPSPPS PPPPPPPSPP 2340 PRPPPPPRPP RPSPPVPPPQ GSPPVPPPSP KPPTPPSPPP VPPAPPSPKP PSPLPPQPSP 2400 TPPTPPPAPY RPDAPPSPPN PPPRPPRPPA PRPPTSSPPP VPAPPSPPAP VASGVPACNG 2460 CSPVFGSLGN DMGAAPAVAT VCPPGYLISR LVFSSARSGS 2520 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00059 | Lectin_C | 0.0007 | 4658 | 4780 | 126 | + Lectin C-type domain. This family includes both long and short form C-type | ||
| pfam00059 | Lectin_C | 5.0e-8 | 3101 | 3225 | 125 | + Lectin C-type domain. This family includes both long and short form C-type | ||
| pfam00059 | Lectin_C | 1.0e-10 | 1341 | 1478 | 138 | + Lectin C-type domain. This family includes both long and short form C-type | ||
| pfam00059 | Lectin_C | 1.0e-12 | 5719 | 5846 | 128 | + Lectin C-type domain. This family includes both long and short form C-type | ||
| pfam00059 | Lectin_C | 1.0e-16 | 5543 | 5668 | 127 | + Lectin C-type domain. This family includes both long and short form C-type | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_001698388.1 | 0 | 114 | 864 | 44 | 757 | hypothetical protein CHLREDRAFT_168182 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001698388.1 | 0 | 978 | 1852 | 757 | 1549 | hypothetical protein CHLREDRAFT_168182 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001698388.1 | 0 | 2569 | 2971 | 1601 | 2003 | hypothetical protein CHLREDRAFT_168182 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001698388.1 | 0 | 3031 | 6762 | 2004 | 5577 | hypothetical protein CHLREDRAFT_168182 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001698388.1 | 0 | 6831 | 8988 | 5577 | 7601 | hypothetical protein CHLREDRAFT_168182 [Chlamydomonas reinhardtii] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1hkk_A | 0.00000000000002 | 983 | 1283 | 62 | 344 | A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin |
| PDB | 1lq0_A | 0.00000000000002 | 983 | 1283 | 62 | 344 | A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin |
| PDB | 1lg2_A | 0.00000000000002 | 983 | 1283 | 62 | 344 | A Chain A, High Resoultion Crystal Structure Of Human Chitinase In Complex With Allosamidin |
| PDB | 1lg1_A | 0.00000000000002 | 983 | 1283 | 62 | 344 | A Chain A, Crystal Structure Of Human Chitotriosidase In Complex With Chitobiose |
| PDB | 1guv_A | 0.00000000000002 | 983 | 1283 | 62 | 344 | A Chain A, Structure Of Human Chitotriosidase |
| Transmembrane Domains | |||||
|---|---|---|---|---|---|
| Start | End | ||||
| 13 | 35 | ||||
| 9006 | 9028 | ||||
| Signal Peptide | |||||
|---|---|---|---|---|---|
| Cleavage Site | |||||
| 29 | |||||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AV396964 | 105 | 8159 | 8263 | 1.99965e-42 |
| AV645111 | 158 | 8354 | 8507 | 3e-38 |
| BI999053 | 62 | 479 | 540 | 0.000000000002 |
| FD814124 | 187 | 48 | 221 | 0.00000000002 |
| FD814124 | 63 | 297 | 351 | 0.003 |
| Orthologous Group | |||||
|---|---|---|---|---|---|
| Species | ID | ||||
| Chlamydomonas reinhardtii | Cre01.g002800.t1.3 | g5228.t2 | g5228.t1 | Cre10.g451600.t3.1 | Cre10.g451600.t2.1 |
| Cre10.g458350.t3.1 | Cre10.g458350.t1.3 | ||||
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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