Basic Information | |
---|---|
Species | Chlamydomonas reinhardtii |
Cazyme ID | Cre13.g577050.t1.3 |
Family | GT47 |
Protein Properties | Length: 656 Molecular Weight: 70860.7 Isoelectric Point: 8.4853 |
Chromosome | Chromosome/Scaffold: 13 Start: 2035756 End: 2040621 |
Description | exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 187 | 493 | 0 |
AGPRVYIYDLPPELTTWRNDDRLDRWTTRHFLEMLTATGARVGDPAAADWFYLPVRLRSSSDGHVLRRALEYVQAAQPWFNATGGKDHFVLAVGDMGRLE SERGPLSANVTFVSHWGLYRSKAEQLQSPHWRASHRNATDIVLPVYLTLRKLQKFGILGSRHHPKFATVAPPDVRERNGPLFWFAGRVCQDSSPPRTDVW PNCPKAMGYSAMTRQAVYFHHWNRTGFAVLRGDKQYAKHMLTAKFCFGPMGGGHGQRQFQAALAGCVPVVIGDGVLEAWEPYLDWNDFGVRVAEADIPRL HTILGAI |
Full Sequence |
---|
Protein Sequence Length: 656 Download |
MPDVRASGLS CPAGTSYSSL SLCYWSSPRA AATVQSWHVV GVGSTTLPPR WLVWTLVGAA 60 CLASWMHGTM AVQCHQGCTL HGVCNEELGR CDCPRTRAGA ACEVQLTGEP LKQRCKSMGF 120 SGISSCTSEK NTCPNNCLRR GTCVAGFCLC QPGFFGNDCG LSMVPAGPNG TRTPVVLSDR 180 GYTPRAAGPR VYIYDLPPEL TTWRNDDRLD RWTTRHFLEM LTATGARVGD PAAADWFYLP 240 VRLRSSSDGH VLRRALEYVQ AAQPWFNATG GKDHFVLAVG DMGRLESERG PLSANVTFVS 300 HWGLYRSKAE QLQSPHWRAS HRNATDIVLP VYLTLRKLQK FGILGSRHHP KFATVAPPDV 360 RERNGPLFWF AGRVCQDSSP PRTDVWPNCP KAMGYSAMTR QAVYFHHWNR TGFAVLRGDK 420 QYAKHMLTAK FCFGPMGGGH GQRQFQAALA GCVPVVIGDG VLEAWEPYLD WNDFGVRVAE 480 ADIPRLHTIL GAIGPEEYAR KVRSLRCAAQ HMAFSSVTGA YMGESGRFDA FETLLAVLAA 540 RARHPDTPPE LLRQADPVLD AFMDCRERPG VGGDAGVAGA KGGTSADSGD GKANAGGKAL 600 AAVKVQPLCS VSPYDQADPG VTMCSSLYRN PFQPPAGGLR CVGAGDLAAC PRPWA* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd01966 | Nitrogenase_NifN_1 | 0.006 | 475 | 565 | 96 | + Nitrogenase_nifN1: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). | ||
pfam03016 | Exostosin | 2.0e-33 | 187 | 493 | 325 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001693540.1 | 0 | 70 | 557 | 1 | 488 | exostosin-like glycosyltransferase [Chlamydomonas reinhardtii] |
RefSeq | XP_001693540.1 | 0.0003 | 626 | 655 | 481 | 510 | exostosin-like glycosyltransferase [Chlamydomonas reinhardtii] |
RefSeq | XP_001693783.1 | 0 | 57 | 655 | 25 | 611 | exostosin-like glycosyltransferase [Chlamydomonas reinhardtii] |
RefSeq | XP_001702686.1 | 0 | 74 | 566 | 73 | 554 | exostosin-like glycosyltransferase [Chlamydomonas reinhardtii] |
RefSeq | XP_001703124.1 | 0 | 90 | 569 | 9 | 475 | exostosin-like glycosyltransferase [Chlamydomonas reinhardtii] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
BU654073 | 238 | 92 | 322 | 2.94273e-44 |
FD838948 | 285 | 262 | 535 | 9.99967e-42 |
BI532593 | 144 | 424 | 566 | 4e-34 |
BI532624 | 160 | 408 | 566 | 4e-33 |
HO423892 | 406 | 139 | 523 | 3e-30 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|