| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre13.g583100.t1.3 |
| Family | GT30 |
| Protein Properties | Length: 2500 Molecular Weight: 472707 Isoelectric Point: 6.7081 |
| Chromosome | Chromosome/Scaffold: 13 Start: 2812397 End: 2830693 |
| Description | KDO transferase A |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT30 | 40 | 204 | 4.4e-28 |
| QRLGWSSIERRRGPVIWFHVQEGEVTAALAVVYRCIQEYNEKVTLLLTTPCTQVYRQLCDALPQRVVVQLVPLPNPITISSFLRKWQPQVGVFMETPFHK ELVVLAKRAGVTLALLNAHMPGDQVLAVHVGLGSRQALRQALRSYSLIVPRSDVDVGRFRIFGAT | |||
| Full Sequence |
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| Protein Sequence Length: 2500 Download |
| MEGRRDLIQF ALGCATLPAS LASLGYRLWR QQESVSTALQ RLGWSSIERR RGPVIWFHVQ 60 EGEVTAALAV VYRCIQEYNE KVTLLLTTPC TQVYRQLCDA LPQRVVVQLV PLPNPITISS 120 FLRKWQPQVG VFMETPFHKE LVVLAKRAGV TLALLNAHMP GDQVLAVHVG LGSRQALRQA 180 LRSYSLIVPR SDVDVGRFRI FGATLGQMPG WSSDLQQAAE LGGCVSAVMS PRWRLSRALH 240 KRLAKRQVWA ATSTLPAEDV AVSRVHAALR SRHRGLLTIV APGENSNNGG SSGSGGGAAV 300 QRSHASTAAR RIAAEKRLHV ELLSAVAANP DRLTPDVDVL VLDDPEALAA LLSLCEVALV 360 GGSLVPSVDG ATGPAAATVA VAGCAVLMGP YGGAQLALAS ELNHAAMVAS EEAAAAVACT 420 GAAAARGAAA GSMDTPREGA GTHGAAGGAG GGPEQGTPVQ GGWGAMIAEA QRPGASLRPM 480 TAPPTIPETF NLRPATPGSL SSVDPTYGAM YYSGTPYGSS GGARPGTSGS GAPGTAGASE 540 RLVLWQETSA RSVGSMGSGS YGYHHGASGG GAATPSGSVG GTPALAGSGG SRTRGSRTRS 600 RTVDRFRWST AAAQNSGFGY SWDSEEEAEE DEEEGGPRDE DRLPSSDSQT ALDAKPSAGD 660 PPAHMSAPGS PDENRMADQG AGALNGSAAP GGRPSSTAVA SSGRFPAPAT TTTSRFLPHD 720 DGCRAGAASA CGVSAAVSPA RSTDLLVVPA ITSPSQVSQA SLARVAAAVY ANTTSSWSRA 780 SSEHAFDAEE HAAAIPACSS GAAAVLGSGA AADNAAQSEC SDDEFVDAES DDLEAVQRPT 840 QQEPEDEAEQ ESEQNPQQKP EEEPEQEAEQ EAEQEAEHEA KQEPEQEAEP DMAVMPLAGL 900 SPMGRVQPVV ASVQCPAASE EARDEGQEVA PGVARAAAHQ QPEVQQEQEA GEEQQQPEEG 960 KQPEEDRHQR EQEHQQDKAE ELEPNEAAER QQAAAPPAAA EVSAAASAKA ASPAARLATR 1020 AKRRLNACGG RSPGRAPAAT ATTPALQTDT LDADDESSPP STATSEAATV AGAAAGALTA 1080 ADAAVPSAAS VVISLAAAPF IASAIVALPS AAATVPVASP FSAGLDSLPE QVAAVFTQPP 1140 PQPPRAASAV VTRTVLDTRR RSLGSSEYSA NSARSGSGGV RLHQLYHLPA AGAVPHSGAH 1200 SLPMLNAAVR GAQSANGGVQ NVPSEDTAGE EPWASDMSLA AMLRGDSSTS AEVTVAVPSL 1260 PSSATAVSRE PSCNWGAPAL LSESPPLSRA SFEHYLRTMQ QQQQQSLGSP SPQPQPGSRF 1320 SQRVARSASG AGALGSSSAS CLDIGCAPAA AAAPAQSMVA ETQPAAAPAA GATVPSAAAQ 1380 AEAAGSASAV AAASPAAPST SAPTIATEPA PAPAPEAADE AVEQSGSDGE RRRHSTDDML 1440 MESAELPPLP SIGSRQWRQR DLGERPLTIF RFSSSGRTTT MVGSASAAAA AAEAAASAAS 1500 AAAAAFNASL PAGNQGKEEQ ARASTGVQVG AGEEAAGAAA TTLAASPTGA GAGEVTASVM 1560 LEEASASPVT TGTSAADFEF PEGARPTDES SAGSPTLITP PSGLGSARGS VTALHALDPG 1620 AVVAAAAAAA NASGLSLPGL SLPGLQTGSL GLGTPLSIAA INAGAGTGAG LGAAVMGPTS 1680 TSSVASTASI GLSAGAFTGS TTRWSGHQNA SSESAGLVGP VAVGAGAPPA SLGSWPSPGG 1740 CTSGSRSGRV SQDSAASCSS AVAPSYTYAA AVAAGATATG AVATGRSAAA PTAEGAGETR 1800 DREQSVFSKW LYGGGPVPLR QLGGGLAVST EELGSGDAGS SLIAGGACSG LLPPSPAGSA 1860 PAPACEGSIA SGSGGARGRQ GLLGGSSDDD EWEHPENDTE SPGAASSVAA AATLTGGPSG 1920 AGSGSSTATA TAAADTAFGS YQPAASAVDA VHAAIAAAAA SNTRARGSAV RPGFHQVASM 1980 SSWLDHIGHL VAAPSPELQR TAAQHDPLAW FPPEHAAPVD SAGGSDGGTG SDRPRARAAG 2040 GVGSGGRRRG SMLEGVAPGL RAPMHSPERP DEGLVMPLGA LAAVRTQLFP APPAGAGEND 2100 QEPQGGASQR RGSLCFGMAV SPSRQVASAS VPSAFTPGGR PLFAAGGQPN LGTSLPQLPQ 2160 LPALPALGFV VAGTSEPVAG GRPNHNSPHR MTAWLNSADP AFAAAPASPP SPQHLSGSGR 2220 SLPGASSPVP PPPRCSTDAL TALLSSPRSP VSPVRVARGG APGAQPDRRA LANAVLLARA 2280 AAVHAACASQ GSVPGCPAGE AGVAAPGSPA VAWPLPVQPQ QINTPRRQLQ RNVSAPVQRS 2340 LGSPPLSPRA APAPLVPPMS PRRAAPAAAA SASAFSSAVA AALAAASGTT ADAAGDQRAS 2400 APQLGWAGLR QEQQQQLPQP QPHQLRTRPL PPPPTAWPFT TLPPGRRSEN GLGSIPGWDT 2460 LETLVSHPMH NRCSANGMLE TAAFVGGFFP APSPSRAPAP |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04413 | Glycos_transf_N | 3.0e-15 | 40 | 203 | 172 | + 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family. | ||
| PRK05749 | PRK05749 | 4.0e-20 | 17 | 282 | 280 | + 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | ||
| COG1519 | KdtA | 5.0e-24 | 10 | 282 | 282 | + 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | ||
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABE80128.2 | 9e-29 | 11 | 393 | 13 | 364 | Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal [Medicago truncatula] |
| EMBL | CBI30224.1 | 4e-21 | 40 | 393 | 44 | 366 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_001785075.1 | 8e-24 | 23 | 403 | 35 | 384 | predicted protein [Physcomitrella patens subsp. patens] |
| RefSeq | XP_002322900.1 | 6e-25 | 11 | 393 | 17 | 367 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528642.1 | 1e-24 | 40 | 402 | 48 | 378 | 3-deoxy-d-manno-octulosonic-acid transferase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DT638640 | 245 | 40 | 282 | 2e-16 |
| DY269671 | 273 | 11 | 282 | 0.0000000000004 |
| DY266328 | 273 | 11 | 282 | 0.0000000000008 |
| FC910573 | 273 | 11 | 282 | 0.000000000002 |
| CX668316 | 258 | 29 | 282 | 0.000000000008 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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