| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre16.g653350.t1.2 |
| Family | CE11 |
| Protein Properties | Length: 610 Molecular Weight: 66185.9 Isoelectric Point: 4.1238 |
| Chromosome | Chromosome/Scaffold: 16 Start: 1533320 End: 1539376 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE11 | 243 | 514 | 0 |
| DEPYVEAALANITEPNPFTTALAKGDVEVLGVEALLSALEACGVDNARIEIEGGAEVPVIDGSAGGWASQIQTSGLTHALPRDDLPVPGGEFPAPADGEE AAAGDAEARKQRVCKMVLRPQEVVSVQRGASFVTLYPEDTFRLTVGLDRHLEAPVIGKQWFSWCMFEDLHYMHSLADARSWVSSPQQAMAMRDAGWLLGG TEGAMLIGNGDSWYDHTIVRHPRDEPARHQMQDLIGDLSLLARHGHSGLPLGHVVAYDADHELFAAFVERLQ | |||
| Full Sequence |
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| Protein Sequence Length: 610 Download |
| MNSTLNRRLA QTSTGVALLP CPRLHRLQTV SHSPIQAAAP CPARAAEQLP SLTSSRAVAA 60 AAGRQAEAAS ATNDRKRTRL AADKSPELID PQLLAPIPMP TEYQQTLWAS FTIAGVGLHS 120 GEYAVVRVRP AFAGEGRYFV RVPEGTNAAR GEESLVRMLE AGAGKQPEEE EAMDDTATRE 180 YKRELIAAYQ EYVDAQEDDG FNGTFADYMN GKSYVALLQR LREEGPPRFS FSEAEAPQPR 240 GEDEPYVEAA LANITEPNPF TTALAKGDVE VLGVEALLSA LEACGVDNAR IEIEGGAEVP 300 VIDGSAGGWA SQIQTSGLTH ALPRDDLPVP GGEFPAPADG EEAAAGDAEA RKQRVCKMVL 360 RPQEVVSVQR GASFVTLYPE DTFRLTVGLD RHLEAPVIGK QWFSWCMFED LHYMHSLADA 420 RSWVSSPQQA MAMRDAGWLL GGTEGAMLIG NGDSWYDHTI VRHPRDEPAR HQMQDLIGDL 480 SLLARHGHSG LPLGHVVAYD ADHELFAAFV ERLQELTTEE DWVPIQDIAG PSVATDYEEL 540 LGSLLEGDEG EDDEGEGGEG AQLADQGAEE DEDEVYDEYE EDEGEGEEYD EYEEEGEEAP 600 GPEAGRARR* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0774 | LpxC | 4.0e-6 | 103 | 142 | 40 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| PRK13186 | lpxC | 2.0e-8 | 103 | 142 | 40 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| pfam03331 | LpxC | 6.0e-34 | 243 | 518 | 278 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| COG0774 | LpxC | 4.0e-36 | 243 | 527 | 287 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| PRK13186 | lpxC | 5.0e-39 | 242 | 534 | 294 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAL53384.1 | 0.00000004 | 97 | 146 | 672 | 721 | DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 (ISS) [Ostreococcus tauri] |
| EMBL | CAL53384.1 | 8.40779e-45 | 232 | 520 | 775 | 1033 | DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20 (ISS) [Ostreococcus tauri] |
| RefSeq | XP_001698142.1 | 0 | 1 | 478 | 1 | 444 | hypothetical protein CHLREDRAFT_177090 [Chlamydomonas reinhardtii] |
| RefSeq | XP_001712863.1 | 0 | 102 | 516 | 24 | 400 | hypothetical protein BNATCHR284 [Bigelowiella natans] |
| RefSeq | XP_002500440.1 | 2.99878e-43 | 268 | 513 | 63 | 280 | predicted protein [Micromonas sp. RCC299] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4fw7_D | 0.000000000000003 | 240 | 483 | 44 | 252 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 4fw7_C | 0.000000000000003 | 240 | 483 | 44 | 252 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 4fw7_B | 0.000000000000003 | 240 | 483 | 44 | 252 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 4fw7_A | 0.000000000000003 | 240 | 483 | 44 | 252 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| PDB | 4fw6_D | 0.000000000000003 | 240 | 483 | 44 | 252 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FD877830 | 183 | 355 | 533 | 0 |
| BP095347 | 115 | 1 | 115 | 0 |
| CO485135 | 268 | 244 | 511 | 3.99931e-42 |
| GE252752 | 222 | 299 | 514 | 2e-35 |
| FL511123 | 245 | 271 | 513 | 5e-33 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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