| Basic Information | |
|---|---|
| Species | Chlamydomonas reinhardtii |
| Cazyme ID | Cre16.g665800.t1.2 |
| Family | GT5 |
| Protein Properties | Length: 652 Molecular Weight: 71155.4 Isoelectric Point: 7.7084 |
| Chromosome | Chromosome/Scaffold: 16 Start: 3135053 End: 3140817 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 149 | 647 | 0 |
| HIIHITAEMAPIAKVGGLGDVVTGLAKAALARGHFVTVMLPFYECLPKDQIEGLKHECDIEVPKGYRWDGEIRVGPLKTSVFWGRVQGCPVYLIKPADDT NCNIFRGGRIYGGSYNEMEAYLYFCRACLEYLNVSQQNPHVLQLHDWHAAAASMLYWDVYNPNGFSRTRLMLTIHNLDNTGETRQDEFFFTGVPGENFAT IDKALDERTIGHNPERLNLMKGGIVYCNAVTTVSPTYANEVLNGGAAGWLRSTFARPELRSKFHGILNGIDCEEWNPATDALLPANFDADRPAGKALCKE FLQKGLGLEVDPRKPLVAVVSRLVPQKGIHLIKAALFRTVEKGGQFVLLGSGHSDPAFRQLADGQFKDHPNCRLKIMYSERLAHMIYAAADVVVVPSMFE PCGLTQMIALRYGAVPLVRRTGGLADTVFDVDGPAGGPAQPRNGFVFDGSDDGALHGALDRALTLYTTQPERWAALQQDNMRLDVSWGKSAKSYVDVYR | |||
| Full Sequence |
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| Protein Sequence Length: 652 Download |
| MKSFMRRDAL GAGLRGAAST KPVSRVASVR PAPTAYRTAC QVAKVDEMVS VDEELTRLRK 60 ENELLRAQLA LYQQNQQPSV GAAAVAPPAA ATKVLEKPAP AKQASVDGGI IWPKPGEAFW 120 ERSPRASPMP LQGGAAEAPP VERDGNPMHI IHITAEMAPI AKVGGLGDVV TGLAKAALAR 180 GHFVTVMLPF YECLPKDQIE GLKHECDIEV PKGYRWDGEI RVGPLKTSVF WGRVQGCPVY 240 LIKPADDTNC NIFRGGRIYG GSYNEMEAYL YFCRACLEYL NVSQQNPHVL QLHDWHAAAA 300 SMLYWDVYNP NGFSRTRLML TIHNLDNTGE TRQDEFFFTG VPGENFATID KALDERTIGH 360 NPERLNLMKG GIVYCNAVTT VSPTYANEVL NGGAAGWLRS TFARPELRSK FHGILNGIDC 420 EEWNPATDAL LPANFDADRP AGKALCKEFL QKGLGLEVDP RKPLVAVVSR LVPQKGIHLI 480 KAALFRTVEK GGQFVLLGSG HSDPAFRQLA DGQFKDHPNC RLKIMYSERL AHMIYAAADV 540 VVVPSMFEPC GLTQMIALRY GAVPLVRRTG GLADTVFDVD GPAGGPAQPR NGFVFDGSDD 600 GALHGALDRA LTLYTTQPER WAALQQDNMR LDVSWGKSAK SYVDVYRSIS A* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0297 | GlgA | 2.0e-134 | 148 | 649 | 516 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PLN02939 | PLN02939 | 2.0e-158 | 148 | 651 | 509 | + transferase, transferring glycosyl groups | ||
| PRK00654 | glgA | 2.0e-164 | 148 | 649 | 512 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 0 | 148 | 649 | 508 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 149 | 648 | 505 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACL36485.1 | 0 | 73 | 649 | 91 | 652 | starch synthase VI precursor [Picea glauca] |
| GenBank | EEH51281.1 | 0 | 157 | 651 | 1 | 496 | glycosyltransferase family 5 protein [Micromonas pusilla CCMP1545] |
| RefSeq | XP_001415787.1 | 0 | 113 | 649 | 32 | 567 | predicted protein [Ostreococcus lucimarinus CCE9901] |
| RefSeq | XP_001701469.1 | 0 | 1 | 651 | 1 | 651 | soluble starch synthase [Chlamydomonas reinhardtii] |
| RefSeq | XP_002500693.1 | 0 | 107 | 651 | 30 | 571 | glycosyltransferase family 5 protein [Micromonas sp. RCC299] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 148 | 646 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 148 | 646 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 148 | 646 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 148 | 646 | 1 | 473 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 148 | 646 | 1 | 473 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BI997899 | 226 | 334 | 559 | 0 |
| BI722913 | 225 | 334 | 558 | 0 |
| BI716761 | 222 | 270 | 491 | 0 |
| BI719688 | 216 | 233 | 448 | 0 |
| BI725703 | 199 | 335 | 533 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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