| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.037200.1 |
| Family | AA3 |
| Protein Properties | Length: 739 Molecular Weight: 81546.8 Isoelectric Point: 8.0599 |
| Chromosome | Chromosome/Scaffold: 00476 Start: 170868 End: 174146 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| AA3 | 216 | 735 | 1.82169e-44 |
| QKGLEVIEDKKHGNAYKIKCDVVIVGSGCGGGVAAAVLAKSGLKVVVLEKGNYFVAEDYSSLEGPSMNELYESGGLKSTLDGKVMLLAGTTVGGGSAINW SASIKTPKSILDEWSTDYKIPLYGSIDYQLAMDAVCDRIGVTEECPVESFQNQVLRKGCENLGLKVDSVSRNSSKDHYCGSCCYGCRVGDKKGTDTTWLV DAVEYGAVILTGCQADKFILDNTNNTSKRKRCIGVIATPRSKNITKKLHIEAKATISACGSLLTPPLLIASGLRNKNIGTNLHLHPVSLVWGYFPEELSD FKGKIYEGGLITSLHKVVSKYSNSHAIIETPAVGPASFAALFPWTSGREMKDAMVKYSRTAHLFALIRDQGAGEIKVKANVKYRLNQTDKENLRIGLRQA LRILIAAGATEVGTYRSDGQRIRCQGTNKEELEEFLDSVEAVGGPLSRQKYWTMYCSAHQMSSCRMGSTKEEGAVDENGESWEAEGLFVCDGSVLPTAVG VNPMITIQSTAYCISKKIAE | |||
| Full Sequence |
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| Protein Sequence Length: 739 Download |
| MEDTEVPSHP LLRTRRTDLN HDFSSSQMEA MAAFCEALIP PVPLFKESPL DQSLLSFYQS 60 SAFQAPIPDE VADLLVERAN PKAVFLVKLV LRLLSFRIGT LLLCGNVCFD WRWPFFLKFS 120 EISLEKRERI LKNWSMAHHK YTVLLRMTFM IIKIFCCFKF FSRIDEGTKN VAWKGMGYKV 180 DTRKQLNHTQ KERPLERGMI ETGNEDDSTL LRSLSQKGLE VIEDKKHGNA YKIKCDVVIV 240 GSGCGGGVAA AVLAKSGLKV VVLEKGNYFV AEDYSSLEGP SMNELYESGG LKSTLDGKVM 300 LLAGTTVGGG SAINWSASIK TPKSILDEWS TDYKIPLYGS IDYQLAMDAV CDRIGVTEEC 360 PVESFQNQVL RKGCENLGLK VDSVSRNSSK DHYCGSCCYG CRVGDKKGTD TTWLVDAVEY 420 GAVILTGCQA DKFILDNTNN TSKRKRCIGV IATPRSKNIT KKLHIEAKAT ISACGSLLTP 480 PLLIASGLRN KNIGTNLHLH PVSLVWGYFP EELSDFKGKI YEGGLITSLH KVVSKYSNSH 540 AIIETPAVGP ASFAALFPWT SGREMKDAMV KYSRTAHLFA LIRDQGAGEI KVKANVKYRL 600 NQTDKENLRI GLRQALRILI AAGATEVGTY RSDGQRIRCQ GTNKEELEEF LDSVEAVGGP 660 LSRQKYWTMY CSAHQMSSCR MGSTKEEGAV DENGESWEAE GLFVCDGSVL PTAVGVNPMI 720 TIQSTAYCIS KKIAESLN* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03970 | Rv0697 | 0.005 | 672 | 737 | 67 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 1.0e-21 | 595 | 729 | 135 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 6.0e-27 | 279 | 722 | 494 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam00732 | GMC_oxred_N | 3.0e-85 | 282 | 502 | 224 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF22878.1 | 0 | 20 | 737 | 2 | 716 | alcohol oxidase [Glycine max] |
| EMBL | CAN71289.1 | 0 | 10 | 737 | 7 | 735 | hypothetical protein [Vitis vinifera] |
| EMBL | CAP15763.1 | 0 | 8 | 737 | 9 | 746 | long chain fatty alcohol oxidase FAO2 [Lotus japonicus] |
| RefSeq | XP_002285334.1 | 0 | 10 | 737 | 7 | 735 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002529832.1 | 0 | 9 | 737 | 8 | 741 | electron carrier, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3nne_H | 0.0005 | 307 | 722 | 93 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_G | 0.0005 | 307 | 722 | 93 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_F | 0.0005 | 307 | 722 | 93 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_E | 0.0005 | 307 | 722 | 93 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| PDB | 3nne_D | 0.0005 | 307 | 722 | 93 | 515 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO794753 | 738 | 9 | 737 | 0 |
| HO779224 | 450 | 204 | 652 | 0 |
| EX275136 | 290 | 443 | 732 | 0 |
| EL893058 | 288 | 410 | 697 | 0 |
| FN753067 | 295 | 263 | 556 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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