| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.042020.1 |
| Family | GH14 |
| Protein Properties | Length: 462 Molecular Weight: 52514 Isoelectric Point: 7.6787 |
| Chromosome | Chromosome/Scaffold: 00540 Start: 530565 End: 533134 |
| Description | beta-amylase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 23 | 449 | 0 |
| YVMLPVDIFERGPSGIVTLTKMKAVRASLRALKLAGVHGVAVEVWWGVVECFSPMIYDWSLYEALFRLISEAGLKLHAALSFHSDTRWTVKGKEGVSLPL WIMEIGARNKHIYYQDQKGMTNGDYLTLGVDHLPVLYTRSALQCYEDFIFNFVKNFGHSIGDLIQEISIGLGPSGELRYPAHPFADGRWMFPGIGEFQCY DKYMLADLKIAADQIGKPQWGNRGPQNAGDYNSSPSGAPFFEGGEGSFLSEYGHFFLNWYSGRLIEHADAILGKAAQILKRYLQKDHPSVTLVAKLGGIY WWYKTFSHPAELTAGYYNTETRDGYDPVTSMLSRHGAALHFPCLEMVDDETPSLYDCSPERLFKQIVDASKQNFVHLIGRNTNERFDKDGFWQIHANCCH PGNDAVKSFTFFRLTKQFFWHENWINF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 462 Download |
| MDAREKSSRK IVNSKRHKIV PVYVMLPVDI FERGPSGIVT LTKMKAVRAS LRALKLAGVH 60 GVAVEVWWGV VECFSPMIYD WSLYEALFRL ISEAGLKLHA ALSFHSDTRW TVKGKEGVSL 120 PLWIMEIGAR NKHIYYQDQK GMTNGDYLTL GVDHLPVLYT RSALQCYEDF IFNFVKNFGH 180 SIGDLIQEIS IGLGPSGELR YPAHPFADGR WMFPGIGEFQ CYDKYMLADL KIAADQIGKP 240 QWGNRGPQNA GDYNSSPSGA PFFEGGEGSF LSEYGHFFLN WYSGRLIEHA DAILGKAAQI 300 LKRYLQKDHP SVTLVAKLGG IYWWYKTFSH PAELTAGYYN TETRDGYDPV TSMLSRHGAA 360 LHFPCLEMVD DETPSLYDCS PERLFKQIVD ASKQNFVHLI GRNTNERFDK DGFWQIHANC 420 CHPGNDAVKS FTFFRLTKQF FWHENWINFV PFIKMMSTNS Y* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 4.0e-92 | 20 | 456 | 447 | + beta-amylase | ||
| PLN02801 | PLN02801 | 1.0e-117 | 20 | 459 | 456 | + beta-amylase | ||
| PLN00197 | PLN00197 | 2.0e-126 | 5 | 456 | 457 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 1.0e-135 | 14 | 457 | 448 | + beta-amylase | ||
| PLN02161 | PLN02161 | 0 | 1 | 459 | 459 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK76508.1 | 0 | 1 | 459 | 26 | 483 | putative beta-amylase [Arabidopsis thaliana] |
| DDBJ | BAH20280.1 | 0 | 1 | 459 | 40 | 497 | AT5G55700 [Arabidopsis thaliana] |
| RefSeq | NP_568829.2 | 0 | 1 | 459 | 73 | 530 | BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002265698.1 | 0 | 1 | 459 | 63 | 521 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002464915.1 | 0 | 20 | 457 | 92 | 514 | hypothetical protein SORBIDRAFT_01g028700 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 20 | 459 | 6 | 438 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xgi_A | 0 | 20 | 459 | 10 | 442 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xgb_A | 0 | 20 | 459 | 10 | 442 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xg9_A | 0 | 20 | 459 | 10 | 442 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xfy_A | 0 | 20 | 459 | 10 | 442 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT743582 | 283 | 174 | 456 | 0 |
| EX314375 | 273 | 122 | 393 | 0 |
| GO368294 | 273 | 75 | 346 | 0 |
| DY945573 | 253 | 189 | 441 | 0 |
| BU103692 | 438 | 20 | 457 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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