y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.042790.1 |
Family | CBM43 |
Protein Properties | Length: 459 Molecular Weight: 49525.7 Isoelectric Point: 4.742 |
Chromosome | Chromosome/Scaffold: 00540 Start: 1126257 End: 1127871 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 370 | 453 | 1.4e-34 |
WCVANGKVAPEKLQAGLDYACGEGGADCSSIQPGATCYNPNSLEAHASYAFNSYYQKMKRAVGTCDFGGAAYVVTQPPQYGQCE | |||
GH17 | 24 | 341 | 0 |
VGVNYGRIADDLPSPDDVVKLLKTHGIDRIKLFDTESTVLTALSNSNISVVVSLPNEYLSSAASDPSFTDNWVQSNISHFYPSTKIDAIAVGNEVFVDPN NTTNFLVPAMKNVYASLQKFNLHTNIKVSTPLAFSALASSYPTSSGSFKPDLIEPVMKPMLDLIRQSQSHLMVNAYPFFAYIGNADKISIDYALFRENAG VIDSGNGLKYSNLLEAQVDAVFAALSAIKFEDIPVVVTETGWPSKGDENEIGASIENAAAYNGNLVKRVLTGSGTPLRPKEPLNAYLFALFNENKKQGPT SERNYGLFYPNEEKVYEI |
Full Sequence |
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Protein Sequence Length: 459 Download |
MAFFSSLSFF LLFSSFLSHA AGWVGVNYGR IADDLPSPDD VVKLLKTHGI DRIKLFDTES 60 TVLTALSNSN ISVVVSLPNE YLSSAASDPS FTDNWVQSNI SHFYPSTKID AIAVGNEVFV 120 DPNNTTNFLV PAMKNVYASL QKFNLHTNIK VSTPLAFSAL ASSYPTSSGS FKPDLIEPVM 180 KPMLDLIRQS QSHLMVNAYP FFAYIGNADK ISIDYALFRE NAGVIDSGNG LKYSNLLEAQ 240 VDAVFAALSA IKFEDIPVVV TETGWPSKGD ENEIGASIEN AAAYNGNLVK RVLTGSGTPL 300 RPKEPLNAYL FALFNENKKQ GPTSERNYGL FYPNEEKVYE IPLTSADVEG GVGSTPAVNG 360 SKVIKNGQTW CVANGKVAPE KLQAGLDYAC GEGGADCSSI QPGATCYNPN SLEAHASYAF 420 NSYYQKMKRA VGTCDFGGAA YVVTQPPQYG QCEFPTEY* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 256 | 334 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 6.0e-27 | 369 | 441 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-41 | 369 | 454 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-98 | 24 | 341 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL77689.1 | 0 | 21 | 456 | 24 | 458 | AT5g55180/MCO15_13 [Arabidopsis thaliana] |
GenBank | AAM66024.1 | 0 | 21 | 456 | 24 | 458 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
DDBJ | BAB08587.1 | 0 | 21 | 447 | 24 | 449 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_001154780.1 | 0 | 16 | 447 | 19 | 449 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_568822.1 | 0 | 21 | 456 | 24 | 458 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 24 | 341 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 24 | 341 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 24 | 341 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 24 | 341 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 24 | 341 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |