| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.047530.1 |
| Family | GT5 |
| Protein Properties | Length: 992 Molecular Weight: 112377 Isoelectric Point: 5.1267 |
| Chromosome | Chromosome/Scaffold: 00542 Start: 2525834 End: 2534182 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 495 | 978 | 0 |
| VIHIAAEMAPVAKVGGLGDVITGLSKALQSRGHLVEIVLPKYDCMEYSRIKDLRLLDAVLESYFDGRLFKNKIWVGTVEGLPVYFIEPLHPDKFFWRAQY YGEHDDFRRFSYFSRAALELLTRAGKRPDIIHCHDWQTAFIAPLYWDLYYPKGLNSARICFTCHNFEYQGTAPASDLGSCGLDVDQLNRQDRLQDNSSHE RINAVKGAVVFSNIVTTVSPTYAQEVRRAEGGHGLHSTLNFHSKKFFGILNGIDTEVWNPATDSFIKVQYNANDLQGKAENKDALRRHLGLSSNVRKPLV GCITRLVPQKGIHLIRYAIYRTLELGGQFVLLGSSPVPHIQREFEDIANHFQSHDQIRLVLAYDESLSHWIYAGSDMFIIPSIFEPCGLTQMIAMRYGSI PIVRKTGGLNDSVFDVDDERTPTELQNGYTFLTPDEQGMNSALERAFSHYLNNPSSWKQLVQKVMDVDFSWETSAAQYEELYSK | |||
| Full Sequence |
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| Protein Sequence Length: 992 Download |
| MAMKLSTLFL SSGFGSLSGK ALDKPQFPYS SRCLLNTSCK MRPRRLSSRR KRKYLKKASY 60 EHLSVHADFH PNDDDDSGSE NVVEGVPILN QESLSSAVSN TSSAAQHNTE KETGEVDTEG 120 LNKGVQLEDL IGMIKNAEKN ILLLNQARVR ALEDLEKILS EKEELQREIN GLEMRLAETD 180 TRIEVAAQEK VHVEQLEDQF EELQKQLNFS SGTEQSMNGN LNDVPIDSLT KELHLLKSEN 240 IDLKNDIQTL KEELSNVKNS DQHLAFLEEE RSVLESSLKD LESKLSTSQE DGSKLSVLNA 300 ECMDLRNRVE HLQVLLDKAT EQADQAIRVL QQNQELQEKV EKLEESLEEA NAFKLSSEKL 360 QQDNELMQQK IGLLEDRLQS SDEELQSYIK LYQESVKDFQ DTLDTIKEAN KKTAIDEPVN 420 DMPLEFWSRL LLLIDGWLLE EKISGDDAKL LKEMAWKRDA RIYDAYMACK EKNELEAVAL 480 FLNLTSSPKR SGLYVIHIAA EMAPVAKVGG LGDVITGLSK ALQSRGHLVE IVLPKYDCME 540 YSRIKDLRLL DAVLESYFDG RLFKNKIWVG TVEGLPVYFI EPLHPDKFFW RAQYYGEHDD 600 FRRFSYFSRA ALELLTRAGK RPDIIHCHDW QTAFIAPLYW DLYYPKGLNS ARICFTCHNF 660 EYQGTAPASD LGSCGLDVDQ LNRQDRLQDN SSHERINAVK GAVVFSNIVT TVSPTYAQEV 720 RRAEGGHGLH STLNFHSKKF FGILNGIDTE VWNPATDSFI KVQYNANDLQ GKAENKDALR 780 RHLGLSSNVR KPLVGCITRL VPQKGIHLIR YAIYRTLELG GQFVLLGSSP VPHIQREFED 840 IANHFQSHDQ IRLVLAYDES LSHWIYAGSD MFIIPSIFEP CGLTQMIAMR YGSIPIVRKT 900 GGLNDSVFDV DDERTPTELQ NGYTFLTPDE QGMNSALERA FSHYLNNPSS WKQLVQKVMD 960 VDFSWETSAA QYEELYSKSV ARAKAAAAGR T* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02316 | PLN02316 | 4.0e-157 | 489 | 976 | 495 | + synthase/transferase |
| PLN02939 | PLN02939 | 0 | 27 | 980 | 963 | + transferase, transferring glycosyl groups |
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 495 | 978 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| TIGR02095 | glgA | 0 | 493 | 979 | 491 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
| PRK00654 | glgA | 0 | 493 | 978 | 488 | + glycogen synthase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT09058.1 | 0 | 1 | 987 | 1 | 999 | starch synthase IV precursor [Solanum lycopersicum] |
| RefSeq | NP_193558.3 | 0.000001 | 1 | 161 | 1 | 219 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_193558.3 | 0 | 254 | 986 | 303 | 1036 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002274716.1 | 0 | 1 | 987 | 1 | 1009 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298514.1 | 0 | 125 | 987 | 30 | 885 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0 | 495 | 978 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 495 | 978 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 495 | 978 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0 | 495 | 978 | 3 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0 | 495 | 978 | 3 | 475 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO851132 | 333 | 568 | 899 | 0 |
| CF828776 | 288 | 616 | 902 | 0 |
| GW865616 | 298 | 599 | 895 | 0 |
| CB893818 | 281 | 492 | 772 | 0 |
| EL448877 | 316 | 421 | 736 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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