Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.047580.1 |
Family | GH3 |
Protein Properties | Length: 779 Molecular Weight: 85262.2 Isoelectric Point: 4.7017 |
Chromosome | Chromosome/Scaffold: 00542 Start: 2549127 End: 2552063 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 74 | 330 | 0 |
GVDRLGLPPYNWWSEALHGVSNVGPGTQFDKVVPGATSFPNVITTASSFNEDLWKTIGQAVSTEARAMYNLGRAGLTYWSPTINVIRDPRWGRTVETPGE DPFVVGKYAKNYVRGLQDVEGSENVTDLNSRPLKVSSCCKHYAAYDVDNWLGVERYSFDARVTEQDMLETFNKPFEMCVKEGDVSSVMCSYNRVNGIPTC ADPVLLKDTIRGNWGLHGYIVSDCDSVKVMVEDAHYLQDTNEDAVAQTLKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 779 Download |
NARVFPRRSL LDDPPAVNNF TFVCDPSRYD KLGLDFSSFG FCDSSLSFPE RAKDLIDRMT 60 LSEKAAQLGH VASGVDRLGL PPYNWWSEAL HGVSNVGPGT QFDKVVPGAT SFPNVITTAS 120 SFNEDLWKTI GQAVSTEARA MYNLGRAGLT YWSPTINVIR DPRWGRTVET PGEDPFVVGK 180 YAKNYVRGLQ DVEGSENVTD LNSRPLKVSS CCKHYAAYDV DNWLGVERYS FDARVTEQDM 240 LETFNKPFEM CVKEGDVSSV MCSYNRVNGI PTCADPVLLK DTIRGNWGLH GYIVSDCDSV 300 KVMVEDAHYL QDTNEDAVAQ TLKAGLDLDC GQIYPNYTES TVRQGKVGMR NIDNALNNLY 360 VVLMRLGYFD GNTGFESLGK PDICSDEHIE LATEAARQGT VLLKNDNDTL PFDPSNYKTL 420 AVVGPHANAT SAMLGNYAGV PCRMNSPMDG LSEYAKVKYQ MGCDSVACKN DTFIFGAMEA 480 ARTSDATVIF VGIDLSIEAE SLDRVDLLLP GYQTQLVQQV ATVSKGPVVL VILSAGGIDV 540 SFAKNNSNIK AIIWAGYPGE EGGRAIADVI FGKFNPGGRL PLTWYENDYV YQLPMTSMPL 600 RPVKSLGYPG RTYKFYDGPV VYPFGHGLSY TFFLHNLTSA KRSIAIDLSN RTQCRDIAYT 660 NGTFKPECPA VLVDDLTCTE EIEFQMEVEN TGERDGSQVL LVYSVPPGGI SSTHIKQVVG 720 FQRVFLKAGD SETVTFKLNA CKSLGLVDFT GYNLLPAGGH TIVVGDGEVS FPVELSFN* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 3.0e-52 | 77 | 428 | 361 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-59 | 60 | 355 | 326 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-62 | 400 | 631 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-83 | 110 | 739 | 673 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 36 | 775 | 753 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002274591.1 | 0 | 8 | 778 | 28 | 801 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 19 | 778 | 45 | 804 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 15 | 777 | 44 | 807 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 54 | 777 | 2 | 693 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 12 | 778 | 39 | 802 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 110 | 738 | 91 | 696 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3u48_A | 0 | 110 | 738 | 91 | 696 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3u4a_B | 0 | 110 | 738 | 91 | 696 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3u4a_A | 0 | 110 | 738 | 91 | 696 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 2x41_A | 9.99967e-42 | 50 | 778 | 2 | 712 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG556917 | 202 | 577 | 778 | 0 |
BX838810 | 324 | 21 | 344 | 0 |
BX837031 | 345 | 21 | 365 | 0 |
GW867030 | 317 | 55 | 371 | 0 |
AJ803048 | 255 | 422 | 676 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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