y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.058280.1 |
Family | CBM43 |
Protein Properties | Length: 334 Molecular Weight: 35169.2 Isoelectric Point: 8.278 |
Chromosome | Chromosome/Scaffold: 00614 Start: 500182 End: 502379 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 253 | 330 | 5.2e-33 |
WCVAKPTVPDPIIQVAMDYACGSGADCKSIQPNGHCYEPNTVLAHASYAFNSYWQNNKVSGGTCDFGGTAMIVTVDPM |
Full Sequence |
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Protein Sequence Length: 334 Download |
MERFCVLLLY FSFAFSPTVL AIPSDDGFYS RKFKFEIHGH GLSRSSTYES SLKKLKLQIQ 60 KRFISKPQLK FLVDQPNAVT VNSPFSLPPF DSLGPTPLPI NSPPFCEDSP PQTPRSSSSP 120 SPPPPPPGMI YSHTPPPPLS GMIYSHAPPP PPPGFQPSVP SRSQSPPPGS PSIFPITPIG 180 PLAPNPPANI SSPTPPIGLP SPPHHYGPPS PPKHGYGPPS PPVFLPPMVY PPPAGPPPAG 240 GHGGKPGSSG AAWCVAKPTV PDPIIQVAMD YACGSGADCK SIQPNGHCYE PNTVLAHASY 300 AFNSYWQNNK VSGGTCDFGG TAMIVTVDPM IEN* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 6.0e-26 | 253 | 323 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-39 | 253 | 329 | 77 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN78496.1 | 1e-38 | 251 | 333 | 174 | 256 | hypothetical protein [Vitis vinifera] |
EMBL | CBI34142.1 | 1e-38 | 251 | 333 | 165 | 247 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002307863.1 | 8.99999e-40 | 253 | 329 | 1 | 77 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002312230.1 | 0 | 81 | 329 | 10 | 291 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 8e-17 | 249 | 329 | 9 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |