| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.063760.7 |
| Family | GH33 |
| Protein Properties | Length: 247 Molecular Weight: 27845.8 Isoelectric Point: 8.065 |
| Chromosome | Chromosome/Scaffold: 00674 Start: 160602 End: 164105 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH33 | 3 | 231 | 2.1e-26 |
| NPVLFKLPSDELLLFYKVGQEVQKWSGCMKRSYDKGITWTAREQLPPGILGPIKNKPILLENGVLLCGSSVESWNSWGAWMEVTSDSGRSWRKFGPIYMK NRSLSVIQPVPYQTANGNLRVLLRSFTGIDSICMSESNDGGHNWSFAIPTNLPNPNSGIDGVKLRDGRLLLVYNTVSRGVLKVGLSLDDGDSWQDVMTLE DEPENEFSYPAVIEASDDSIHITYTYRRK | |||
| Full Sequence |
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| Protein Sequence Length: 247 Download |
| MWNPVLFKLP SDELLLFYKV GQEVQKWSGC MKRSYDKGIT WTAREQLPPG ILGPIKNKPI 60 LLENGVLLCG SSVESWNSWG AWMEVTSDSG RSWRKFGPIY MKNRSLSVIQ PVPYQTANGN 120 LRVLLRSFTG IDSICMSESN DGGHNWSFAI PTNLPNPNSG IDGVKLRDGR LLLVYNTVSR 180 GVLKVGLSLD DGDSWQDVMT LEDEPENEFS YPAVIEASDD SIHITYTYRR KQIKHVVFKL 240 KVHEKH* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00260 | Sialidase | 0.004 | 31 | 197 | 204 | + Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases. | ||
| COG4692 | COG4692 | 3.0e-24 | 2 | 238 | 289 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 2.0e-81 | 1 | 224 | 234 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61202.1 | 0 | 1 | 239 | 79 | 317 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_001078763.1 | 0 | 1 | 239 | 90 | 328 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_001154784.1 | 0 | 1 | 239 | 80 | 318 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_568864.2 | 0 | 1 | 239 | 79 | 317 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| RefSeq | NP_851204.1 | 0 | 1 | 239 | 84 | 322 | BNR/Asp-box repeat family protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3b7f_A | 0.002 | 80 | 205 | 32 | 160 | A Chain A, Crystal Structure Of A Putative Glycosyl Hydrolase With Bnr Repeats (reut_b4987) From Ralstonia Eutropha Jmp134 At 2.20 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CV274814 | 239 | 1 | 239 | 0 |
| CN604871 | 224 | 1 | 224 | 0 |
| DV137355 | 227 | 1 | 227 | 0 |
| ES962106 | 212 | 1 | 212 | 0 |
| FF344386 | 230 | 1 | 230 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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