Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.078100.1 |
Family | CE8 |
Protein Properties | Length: 576 Molecular Weight: 63704 Isoelectric Point: 6.8459 |
Chromosome | Chromosome/Scaffold: 00793 Start: 322775 End: 328221 |
Description | pectin methylesterase 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 268 | 556 | 0 |
AVVAADGSGNYKTVAEAVAAAPSKNSKRYIIKIKAGEYWENVDVPSSKRNIMFWGDGRSNTKIISNRSHGTGWSTFRSATLAAVGDGFLARDITFQNKAG AANGQAVALRVGSDHSAFYRCSMLAYQDTLYVHSNRQFFVNCIVAGTVDFIFGNAAAVFQNSDITPRKPGPSQRNMVTAQSRTDINQNTGIVIQKCRIKA TSDLEPVIEEFPSFLGRPWEEYARVVVMQTTISNVIDKEGWSTWNGQRKSPYYAEYDNNGAGADISGRVPWSLVIDEAQAKTFTAGPFI |
Full Sequence |
---|
Protein Sequence Length: 576 Download |
MENNKLSLAL LAILLLTNAI VVRANSNENS VIETSCAITL YPQLCHSTIS SIVGTSNLLS 60 LKDIFEVSLS VAMDAAKHNN KNIKKLMVST NNVSKRDKIG LHDCVETTDR TIYELGKAIE 120 VFREYPNKRS LTLYADDLKT FLSSAITNQV TCLDGLSHDK TEKRVLRLIE NEHIHVTKLC 180 SNALALVQKL TTDIAITDEK SLVVHDFPYK ITSIPSQMDD PKIVLFSNQE EDENRRREEL 240 EDGIKWPKWM SIEDQKLLES SSEAAAEAVV AADGSGNYKT VAEAVAAAPS KNSKRYIIKI 300 KAGEYWENVD VPSSKRNIMF WGDGRSNTKI ISNRSHGTGW STFRSATLAA VGDGFLARDI 360 TFQNKAGAAN GQAVALRVGS DHSAFYRCSM LAYQDTLYVH SNRQFFVNCI VAGTVDFIFG 420 NAAAVFQNSD ITPRKPGPSQ RNMVTAQSRT DINQNTGIVI QKCRIKATSD LEPVIEEFPS 480 FLGRPWEEYA RVVVMQTTIS NVIDKEGWST WNGQRKSPYY AEYDNNGAGA DISGRVPWSL 540 VIDEAQAKTF TAGPFIGGAD WLSSTGFPYQ LSLYK* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 7.0e-131 | 26 | 574 | 556 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 5.0e-136 | 19 | 573 | 577 | + pectinesterase | ||
PLN02301 | PLN02301 | 1.0e-140 | 25 | 573 | 556 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 3.0e-168 | 273 | 558 | 291 | + Pectinesterase. | ||
PLN02313 | PLN02313 | 0 | 18 | 573 | 562 | + Pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF23892.1 | 0 | 18 | 573 | 48 | 576 | AF152172_1 pectin methyl esterase [Solanum tuberosum] |
GenBank | AAO85706.1 | 0 | 26 | 573 | 56 | 579 | pectin methyl-esterase [Nicotiana benthamiana] |
EMBL | CAB95025.1 | 0 | 26 | 573 | 56 | 579 | pectin methylesterase [Nicotiana tabacum] |
RefSeq | XP_002265171.1 | 0 | 29 | 573 | 94 | 611 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002304257.1 | 0 | 25 | 573 | 56 | 579 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 261 | 573 | 2 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 266 | 574 | 3 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 7e-29 | 278 | 561 | 18 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 7e-29 | 278 | 561 | 18 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 7e-29 | 278 | 561 | 18 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |