| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.085720.1 |
| Family | AA1 |
| Protein Properties | Length: 543 Molecular Weight: 61125.4 Isoelectric Point: 9.8687 |
| Chromosome | Chromosome/Scaffold: 00870 Start: 145387 End: 149286 |
| Description | SKU5 similar 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 24 | 497 | 0 |
| DNPYRFFTWKVTYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNLIINVYNYLKEPFLISWNGLQQRRNSWQDGVYGTTCAIPPMRNFTYTLQAKDQIGS YFYFPSTAFHKAAGAFGGIRIWSRPGIPVPFAPPAGDFTVLAGDWYKTNHYIMRQVLDSGKNIPSPDGLLINGRGWNGYTFNVDPGKTYRFRISNVGISA SINFRIQGHLMKLVEVEGSHTLQNTYSSLDIHLGQSYSVLVTANQPPKDYYVVVSSRFTSPILTTTAVLHYSNSWQKVSGPVPGGPTTEIAWSLQQARSI RWNLTASGPRPNPQGSYHYGLIKTSRTIVLANSAPVINGKQRFAVNSVSFVQADTPLKLADYFKIPGVFNLNNIPTNPTWGNAYLQTSVMGSNFREYIEI VFQNWENTVQSWHISGYSFFVVGMDGGQWTPASRSRYNLRDTVARCTTQVYPKSWTAIYMALDNVGMWNVRSES | |||
| Full Sequence |
|---|
| Protein Sequence Length: 543 Download |
| MREYRVLCSL IILVLFAVNE VNADNPYRFF TWKVTYGDIY PLGVKQQGIL INGQFPGPQI 60 DAVTNDNLII NVYNYLKEPF LISWNGLQQR RNSWQDGVYG TTCAIPPMRN FTYTLQAKDQ 120 IGSYFYFPST AFHKAAGAFG GIRIWSRPGI PVPFAPPAGD FTVLAGDWYK TNHYIMRQVL 180 DSGKNIPSPD GLLINGRGWN GYTFNVDPGK TYRFRISNVG ISASINFRIQ GHLMKLVEVE 240 GSHTLQNTYS SLDIHLGQSY SVLVTANQPP KDYYVVVSSR FTSPILTTTA VLHYSNSWQK 300 VSGPVPGGPT TEIAWSLQQA RSIRWNLTAS GPRPNPQGSY HYGLIKTSRT IVLANSAPVI 360 NGKQRFAVNS VSFVQADTPL KLADYFKIPG VFNLNNIPTN PTWGNAYLQT SVMGSNFREY 420 IEIVFQNWEN TVQSWHISGY SFFVVGMDGG QWTPASRSRY NLRDTVARCT TQVYPKSWTA 480 IYMALDNVGM WNVRSESWAR QYLGQQFYLR VYTSSTSFRD ELPIPRNALL CGRASGRHTR 540 PL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 0 | 9 | 539 | 531 | + oxidoreductase | ||
| PLN02835 | PLN02835 | 0 | 11 | 539 | 529 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 1 | 536 | 544 | + copper ion binding / oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 21 | 539 | 522 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 6 | 535 | 546 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95805.1 | 0 | 1 | 542 | 1 | 544 | unknown [Populus trichocarpa] |
| RefSeq | NP_193932.1 | 0 | 5 | 542 | 2 | 541 | sks4 (SKU5 Similar 4); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002272880.1 | 0 | 5 | 542 | 2 | 540 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002332613.1 | 0 | 1 | 542 | 1 | 544 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518462.1 | 0 | 18 | 542 | 17 | 541 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 28 | 532 | 4 | 539 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1asq_A | 0 | 28 | 532 | 4 | 539 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1asp_B | 0 | 28 | 532 | 4 | 539 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1asp_A | 0 | 28 | 532 | 4 | 539 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1aso_B | 0 | 28 | 532 | 4 | 539 | A Chain A, Bacillus Subtilis Pectate Lyase |
