Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.085740.1 |
Family | CBM43 |
Protein Properties | Length: 524 Molecular Weight: 57549.9 Isoelectric Point: 5.9982 |
Chromosome | Chromosome/Scaffold: 00870 Start: 155199 End: 158134 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 380 | 461 | 4.8e-33 |
CIAIDEFDVKTLQTALDWACGPGKANCTEIQPGEVCYQPNNVKNHASYAFDSYYQKEGRTSGSCDFKGLAMITTTDPSHGSC | |||
GH17 | 42 | 361 | 0 |
VGVNIGSDVSNLLSPSDLVSFLHFQKITHIRLYDTNPDILKALKGSKIRVVISVPNNQLLAIGYSNTTAAAWISRNVVAYYPQTLISGISVGDEVLTTIP SASPLLLPAIESLYNALVAANLHTQITISTPHAASIILDPFPPSQAFFNQSLVQFILPLLQFLSRTGSPLMMNFYPYYVFMQNKGVVPLDNALFKPLVPS KEMVDPNTLLHYTNVLDAMIDSAYFSMKNLNITDVVVLVTETGWPSKGDSKEPYATINNADNFNSNLIKHIIDRSGTPFHPEVTSSVYIYELFNEDLRSP PVSEANWGLFYGNSTPVYLL |
Full Sequence |
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Protein Sequence Length: 524 Download |
MADSKFSLFF LFLFVFLTVS EGKFPPLIKG VKVDKDDKQP FVGVNIGSDV SNLLSPSDLV 60 SFLHFQKITH IRLYDTNPDI LKALKGSKIR VVISVPNNQL LAIGYSNTTA AAWISRNVVA 120 YYPQTLISGI SVGDEVLTTI PSASPLLLPA IESLYNALVA ANLHTQITIS TPHAASIILD 180 PFPPSQAFFN QSLVQFILPL LQFLSRTGSP LMMNFYPYYV FMQNKGVVPL DNALFKPLVP 240 SKEMVDPNTL LHYTNVLDAM IDSAYFSMKN LNITDVVVLV TETGWPSKGD SKEPYATINN 300 ADNFNSNLIK HIIDRSGTPF HPEVTSSVYI YELFNEDLRS PPVSEANWGL FYGNSTPVYL 360 LHVSGSGTFL ANDTTNQTYC IAIDEFDVKT LQTALDWACG PGKANCTEIQ PGEVCYQPNN 420 VKNHASYAFD SYYQKEGRTS GSCDFKGLAM ITTTDPSHGS CIFPGSKKMK NNTKETVNST 480 QIPEASGGAA QGLKLWINGE KSPYLFTCSF LILSVLIPLM APW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-5 | 274 | 354 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-20 | 378 | 450 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-40 | 378 | 463 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-82 | 42 | 359 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC17632.1 | 0 | 27 | 457 | 29 | 459 | Similar to glucan endo-1,3-beta-D-glucosidase precursor gb |
EMBL | CBI23232.1 | 0 | 1 | 514 | 11 | 518 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002316541.1 | 0 | 54 | 489 | 1 | 436 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332610.1 | 0 | 54 | 489 | 1 | 436 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518468.1 | 0 | 1 | 497 | 1 | 501 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 42 | 361 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 39 | 362 | 1 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 39 | 362 | 1 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 39 | 362 | 1 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 39 | 362 | 1 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |