y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.089500.1 |
Family | AA3 |
Protein Properties | Length: 510 Molecular Weight: 55205 Isoelectric Point: 8.0122 |
Chromosome | Chromosome/Scaffold: 00894 Start: 904463 End: 907266 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 26 | 509 | 0 |
IPNQEKYDYIIIGGGTAGCPLAATLSSNFSVLVLERGSDPNAFPMVLSQEGMANTLTEDDDGHNPFQRFVSEDGVENIRGRVLGGGSMINVGFYSRAQPE FFKNSSVQWNMEMVEEAYRWIEETVVSRPELGPWQLAFKEALVEAGVGPDNGYDLDHVVGTRIGGSIFDSRGKRHGAVELLNKANPINLKVATQATVKRI IFSRSNGLSATGVLYSDSNGKLHKATISRNGEIILSAGAIGSPQLLLSSGVGPKSDLSSLKLPLVLHNRHVGQSMADNPRLGAAIVLPFLTPPTSVQVVG TLKPNIHIESLSTILPFSISPPFALLPPRSSAVNLSLAIFAGKFSTVSSTGSLRLDRRKNPIVRFNYLSHPDDLERCVEGVRKVGELVNTKVMERIKTRD LEGKMGFEFLGSSLPENMSDYGLVGEFCRKTVTTFWHYHGGCVVGKVVDGNYKVIGVNNLRVVDGSTFSLSPGTNPMATVMMLG |
Full Sequence |
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Protein Sequence Length: 510 Download |
MASLFLLILA LFTFQLQISV LTSQTIPNQE KYDYIIIGGG TAGCPLAATL SSNFSVLVLE 60 RGSDPNAFPM VLSQEGMANT LTEDDDGHNP FQRFVSEDGV ENIRGRVLGG GSMINVGFYS 120 RAQPEFFKNS SVQWNMEMVE EAYRWIEETV VSRPELGPWQ LAFKEALVEA GVGPDNGYDL 180 DHVVGTRIGG SIFDSRGKRH GAVELLNKAN PINLKVATQA TVKRIIFSRS NGLSATGVLY 240 SDSNGKLHKA TISRNGEIIL SAGAIGSPQL LLSSGVGPKS DLSSLKLPLV LHNRHVGQSM 300 ADNPRLGAAI VLPFLTPPTS VQVVGTLKPN IHIESLSTIL PFSISPPFAL LPPRSSAVNL 360 SLAIFAGKFS TVSSTGSLRL DRRKNPIVRF NYLSHPDDLE RCVEGVRKVG ELVNTKVMER 420 IKTRDLEGKM GFEFLGSSLP ENMSDYGLVG EFCRKTVTTF WHYHGGCVVG KVVDGNYKVI 480 GVNNLRVVDG STFSLSPGTN PMATVMMLGX 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 1.0e-24 | 29 | 302 | 325 | + choline dehydrogenase; Validated | ||
pfam05199 | GMC_oxred_C | 2.0e-28 | 374 | 509 | 144 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
TIGR03970 | Rv0697 | 1.0e-36 | 33 | 509 | 531 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
COG2303 | BetA | 5.0e-46 | 30 | 509 | 550 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 2.0e-155 | 30 | 509 | 530 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3GDN | 0 | 32 | 509 | 27 | 506 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
GenBank | AAL11514.1 | 0 | 3 | 509 | 7 | 533 | AF412329_1 R-oxynitrile lyase isoenzyme 1 precursor [Prunus dulcis] |
Swiss-Prot | P52706 | 0 | 32 | 509 | 54 | 533 | MDL1_PRUSE RecName: Full=(R)-mandelonitrile lyase 1; AltName: Full=Hydroxynitrile lyase 1; Short=(R)-oxynitrilase 1; Flags: Precursor |
RefSeq | XP_002277531.1 | 0 | 20 | 509 | 38 | 535 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311915.1 | 0 | 20 | 509 | 8 | 506 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 32 | 509 | 27 | 506 | A Chain A, Crystal Structure Of Human Pofut2 |
PDB | 3gdp_A | 0 | 32 | 509 | 27 | 506 | A Chain A, Crystal Structure Of Human Pofut2 |
PDB | 3gdn_B | 0 | 32 | 509 | 27 | 506 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 32 | 509 | 27 | 506 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 32 | 509 | 27 | 506 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |