Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.089510.1 |
Family | AA3 |
Protein Properties | Length: 530 Molecular Weight: 57836.7 Isoelectric Point: 5.1043 |
Chromosome | Chromosome/Scaffold: 00894 Start: 926590 End: 929114 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA3 | 43 | 528 | 0 |
LLENEEYDYIVIGGGTAGCPLATTLSANFSVLLLERGNVPTKYPTVLSEQAFPNVFTTEDDGENPFQRFVSEDGVEIIRGRVLGGSSMLNAGFYSRGHPE FFDISGVDWDKELVEKAYEWVEESVIFEANINNGWQYAFRKALLEAGVGPYHGFDLNHRIGTKIGGSIFDKEGNRHGSVELLNKAQPNNLKVGIQAVVQK ILFSDLSATGVSYSDSKGNLHTASIRKNGEIIVSAGTIGSPQLLLLSGIGPKSHLESLKIPVVLHQPYVGQSMSDNPRYTVHVILPYPMATSAVKAVGTL ENNVHLQSITGFLPFSLPPSFSLVPPGLDSVNLSLASLVGKFSEVLSEGSLYLTSSTDVKENPSVSFNYYSHPDDLAKCVRGVRKMGDLLKTEAMENIKI QDFEGNKRFAFLEPSLPGNLSDVGLVEEFCKKTVTTYWHYHGGCLVGKVVDGNYKVIGIENLRVVDGSTFVDSPGTNPMATVMMLG |
Full Sequence |
---|
Protein Sequence Length: 530 Download |
MASFLLFILM SMLHFQFGFP LSSNSNPNED LKYMNFVQDA SELLENEEYD YIVIGGGTAG 60 CPLATTLSAN FSVLLLERGN VPTKYPTVLS EQAFPNVFTT EDDGENPFQR FVSEDGVEII 120 RGRVLGGSSM LNAGFYSRGH PEFFDISGVD WDKELVEKAY EWVEESVIFE ANINNGWQYA 180 FRKALLEAGV GPYHGFDLNH RIGTKIGGSI FDKEGNRHGS VELLNKAQPN NLKVGIQAVV 240 QKILFSDLSA TGVSYSDSKG NLHTASIRKN GEIIVSAGTI GSPQLLLLSG IGPKSHLESL 300 KIPVVLHQPY VGQSMSDNPR YTVHVILPYP MATSAVKAVG TLENNVHLQS ITGFLPFSLP 360 PSFSLVPPGL DSVNLSLASL VGKFSEVLSE GSLYLTSSTD VKENPSVSFN YYSHPDDLAK 420 CVRGVRKMGD LLKTEAMENI KIQDFEGNKR FAFLEPSLPG NLSDVGLVEE FCKKTVTTYW 480 HYHGGCLVGK VVDGNYKVIG IENLRVVDGS TFVDSPGTNP MATVMMLGR* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 4.0e-13 | 389 | 528 | 147 | + choline dehydrogenase; Validated | ||
PRK02106 | PRK02106 | 5.0e-37 | 46 | 317 | 334 | + choline dehydrogenase; Validated | ||
TIGR03970 | Rv0697 | 8.0e-39 | 50 | 528 | 542 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
COG2303 | BetA | 3.0e-54 | 46 | 529 | 547 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 5.0e-159 | 6 | 529 | 574 | + Protein HOTHEAD |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL11514.1 | 0 | 1 | 529 | 6 | 534 | AF412329_1 R-oxynitrile lyase isoenzyme 1 precursor [Prunus dulcis] |
Swiss-Prot | P52706 | 0 | 28 | 529 | 33 | 534 | MDL1_PRUSE RecName: Full=(R)-mandelonitrile lyase 1; AltName: Full=Hydroxynitrile lyase 1; Short=(R)-oxynitrilase 1; Flags: Precursor |
Swiss-Prot | P52707 | 0 | 1 | 529 | 6 | 535 | MDL3_PRUSE RecName: Full=(R)-mandelonitrile lyase 3; AltName: Full=Hydroxynitrile lyase 3; Short=(R)-oxynitrilase 3; Flags: Precursor |
RefSeq | XP_002277531.1 | 0 | 3 | 529 | 10 | 536 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311915.1 | 0 | 30 | 529 | 1 | 507 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gdp_B | 0 | 28 | 529 | 6 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdp_A | 0 | 28 | 529 | 6 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3gdn_B | 0 | 28 | 529 | 6 | 507 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3gdn_A | 0 | 28 | 529 | 6 | 507 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 1ju2_B | 0 | 28 | 529 | 6 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |