Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.089540.1 |
Family | AA3 |
Protein Properties | Length: 413 Molecular Weight: 45379.1 Isoelectric Point: 9.5732 |
Chromosome | Chromosome/Scaffold: 00894 Start: 943674 End: 946690 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 2 | 401 | 0 |
LNGGFYSRGHQEFFETAGVKWDMELVKKAYEWVEESVVFEASLNNGWQYAFRNGLLEAGVGPYNGFELNHRLGTKIGGSIFDKEGNRHGSVELLNKAQPN NLKVVVRATVEKIIFSGLSASGVLYSDSKGRLHTASIRKKGEIILSAGAIGSPQLLLLSGVGPKSHLSSLKLPVVLHQPHVGQSMSDNPRFTANIVLPYP LVITAVKVVGTLDDNIHLQSITGFLPFSLPPSFSLLPHRFNSVNLSLATIVGKFSEVFSEGSLKLNSSTDVKKNPIVRFNYYSHPDDLAKCVRGVRKFGD FLKTPTIEKIKIQDFEGKRSFAFLEPPIPENLSDDGVVEKFCKETVTTYWHYHGGCLVGKVVDGNYRVMGIKNLRVVDGSTFSDSPGTNPMATLMMLGRY |
Full Sequence |
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Protein Sequence Length: 413 Download |
MLNGGFYSRG HQEFFETAGV KWDMELVKKA YEWVEESVVF EASLNNGWQY AFRNGLLEAG 60 VGPYNGFELN HRLGTKIGGS IFDKEGNRHG SVELLNKAQP NNLKVVVRAT VEKIIFSGLS 120 ASGVLYSDSK GRLHTASIRK KGEIILSAGA IGSPQLLLLS GVGPKSHLSS LKLPVVLHQP 180 HVGQSMSDNP RFTANIVLPY PLVITAVKVV GTLDDNIHLQ SITGFLPFSL PPSFSLLPHR 240 FNSVNLSLAT IVGKFSEVFS EGSLKLNSST DVKKNPIVRF NYYSHPDDLA KCVRGVRKFG 300 DFLKTPTIEK IKIQDFEGKR SFAFLEPPIP ENLSDDGVVE KFCKETVTTY WHYHGGCLVG 360 KVVDGNYRVM GIKNLRVVDG STFSDSPGTN PMATLMMLGR YVGLNILRER SS* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK02106 | PRK02106 | 5.0e-23 | 102 | 188 | 87 | + choline dehydrogenase; Validated | ||
TIGR03970 | Rv0697 | 1.0e-28 | 2 | 399 | 445 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
pfam05199 | GMC_oxred_C | 3.0e-31 | 259 | 399 | 146 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 2.0e-31 | 1 | 410 | 461 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 8.0e-127 | 2 | 410 | 457 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABE65766.1 | 0 | 2 | 410 | 136 | 550 | mandelonitrile lyase [Arabidopsis thaliana] |
RefSeq | NP_177448.1 | 0 | 2 | 410 | 136 | 550 | (R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative [Arabidopsis thaliana] |
Swiss-Prot | P52706 | 0 | 1 | 412 | 135 | 546 | MDL1_PRUSE RecName: Full=(R)-mandelonitrile lyase 1; AltName: Full=Hydroxynitrile lyase 1; Short=(R)-oxynitrilase 1; Flags: Precursor |
RefSeq | XP_002277531.1 | 0 | 2 | 410 | 132 | 546 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311915.1 | 0 | 2 | 410 | 102 | 517 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 1 | 412 | 108 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 1 | 412 | 108 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 1 | 412 | 108 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 1 | 412 | 108 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 1 | 412 | 108 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM735725 | 259 | 56 | 314 | 0 |
AM731557 | 253 | 40 | 292 | 0 |
JG703116 | 291 | 51 | 341 | 0 |
JG703620 | 266 | 76 | 341 | 0 |
HO796743 | 451 | 2 | 410 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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