Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.089550.1 |
Family | AA3 |
Protein Properties | Length: 508 Molecular Weight: 55460 Isoelectric Point: 6.7558 |
Chromosome | Chromosome/Scaffold: 00894 Start: 955616 End: 957790 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 12 | 503 | 0 |
ESEEYDYIIIGGGTAGCPLAATLSSKFSVLLLERGNDPNKYPSVLNEQGLLNAFVAEDDGQNPFQHFISEDGVENLRGRVLGGGSMINAGFYSRGHRDFF ETAGVDWDRELVEKAYEWVEETVVSKPSLSPWQAAFRSALLEGGVGHDKGFDLRHLVGTKTGGSIFDNKGNRHGAVELLNKGEPKNLKVATQATVQRIIF TGLSASGVSYSDSKGKLHTAFIRKKGEIILSAGAIGSPQLLLLSGVGPKSYLSSLRLPVVLDQPHVGEFMSDNPRFSPTIVLPFQLVSSSAQVVGTLDHN IHLQSFASPLPFFAPPSFSLLPPQFTSIVPSLAIFVGKFSDVHSEGSLRLNSSIDVKESPIVRFNYYSHPDDLARCVRGVRKVGDLLKTPTMEKIKTQDF EGNKRFQFLGLSLPENLLNDTAVEEYCQKTVTTYWHYHGGCLVGKVVDDNHKVIGIDNLRVVDGSTFSVSPGTNPMATLMMLGRYVGLKLLQ |
Full Sequence |
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Protein Sequence Length: 508 Download |
MKFVYEASEL QESEEYDYII IGGGTAGCPL AATLSSKFSV LLLERGNDPN KYPSVLNEQG 60 LLNAFVAEDD GQNPFQHFIS EDGVENLRGR VLGGGSMINA GFYSRGHRDF FETAGVDWDR 120 ELVEKAYEWV EETVVSKPSL SPWQAAFRSA LLEGGVGHDK GFDLRHLVGT KTGGSIFDNK 180 GNRHGAVELL NKGEPKNLKV ATQATVQRII FTGLSASGVS YSDSKGKLHT AFIRKKGEII 240 LSAGAIGSPQ LLLLSGVGPK SYLSSLRLPV VLDQPHVGEF MSDNPRFSPT IVLPFQLVSS 300 SAQVVGTLDH NIHLQSFASP LPFFAPPSFS LLPPQFTSIV PSLAIFVGKF SDVHSEGSLR 360 LNSSIDVKES PIVRFNYYSH PDDLARCVRG VRKVGDLLKT PTMEKIKTQD FEGNKRFQFL 420 GLSLPENLLN DTAVEEYCQK TVTTYWHYHG GCLVGKVVDD NHKVIGIDNL RVVDGSTFSV 480 SPGTNPMATL MMLGRYVGLK LLQQRSS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2303 | BetA | 2.0e-14 | 354 | 495 | 147 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
pfam05199 | GMC_oxred_C | 1.0e-30 | 354 | 494 | 146 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 3.0e-36 | 13 | 285 | 307 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
TIGR03970 | Rv0697 | 7.0e-39 | 17 | 494 | 533 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
PLN02785 | PLN02785 | 8.0e-162 | 7 | 505 | 550 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1JU2 | 0 | 1 | 507 | 12 | 519 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 3GDN | 0 | 1 | 507 | 12 | 519 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
GenBank | AAL11514.1 | 0 | 1 | 507 | 39 | 546 | AF412329_1 R-oxynitrile lyase isoenzyme 1 precursor [Prunus dulcis] |
Swiss-Prot | P52706 | 0 | 1 | 507 | 39 | 546 | MDL1_PRUSE RecName: Full=(R)-mandelonitrile lyase 1; AltName: Full=Hydroxynitrile lyase 1; Short=(R)-oxynitrilase 1; Flags: Precursor |
RefSeq | XP_002277531.1 | 0 | 2 | 505 | 36 | 546 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 1 | 507 | 12 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 1 | 507 | 12 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 1 | 507 | 12 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 1 | 507 | 12 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 1 | 507 | 12 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG703116 | 291 | 146 | 436 | 0 |
AM726975 | 239 | 1 | 238 | 0 |
JG703620 | 266 | 171 | 436 | 0 |
HO796743 | 530 | 17 | 505 | 0 |
AM735725 | 259 | 151 | 409 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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