Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.089560.1 |
Family | AA3 |
Protein Properties | Length: 540 Molecular Weight: 59655.1 Isoelectric Point: 7.107 |
Chromosome | Chromosome/Scaffold: 00894 Start: 961498 End: 964627 |
Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 37 | 528 | 0 |
NANDQPIQEKYDYIVIGGGTTGCPLATTLSSKFSVLLLERGSDPNTYPFVLNEETLSYTFILDDDGQNPIQRFVSEDGVENIRGRVLGGGSMVNAGFYSR GHQEFFETAGVDWDMELVEKAYEWVEETLVSRPNLTAWQAAFRNTLLEGGVVPDNGFDLRHLVGTKIGGSIFDNKGNRHGAVELLNKANPKNLKVVIQAT VQRIIFKGLSAVGVLYSDSKGKLHTALIHKKGEIFLSAGAIGSPQLLLLSGIGPKSYLSSLKLHLVHHQPHVGQYMTDNPRFSRSIIFPFQLLASTAQVV GTLEKNIHLQSLASPLPFFPLPSYGLLPPQSTSITSSLVIIVGKFSNVSSKGWLHLNNSSTDAKENPIVRFNYYSQHGDLSRCVSGVRKVEDLLKTQTME RIKTQDLEGNKGFQFMELPMPENLWNDSSIEEYCKNTVATYWHYHGGCLVGKVVDDNYKVIGIKNLRVVDGSTFSDSPGTNPMATLMMLGRY |
Full Sequence |
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Protein Sequence Length: 540 Download |
MEYSIATFLP LILISIEFLS SHAIPNQDIS YMKFVHNAND QPIQEKYDYI VIGGGTTGCP 60 LATTLSSKFS VLLLERGSDP NTYPFVLNEE TLSYTFILDD DGQNPIQRFV SEDGVENIRG 120 RVLGGGSMVN AGFYSRGHQE FFETAGVDWD MELVEKAYEW VEETLVSRPN LTAWQAAFRN 180 TLLEGGVVPD NGFDLRHLVG TKIGGSIFDN KGNRHGAVEL LNKANPKNLK VVIQATVQRI 240 IFKGLSAVGV LYSDSKGKLH TALIHKKGEI FLSAGAIGSP QLLLLSGIGP KSYLSSLKLH 300 LVHHQPHVGQ YMTDNPRFSR SIIFPFQLLA STAQVVGTLE KNIHLQSLAS PLPFFPLPSY 360 GLLPPQSTSI TSSLVIIVGK FSNVSSKGWL HLNNSSTDAK ENPIVRFNYY SQHGDLSRCV 420 SGVRKVEDLL KTQTMERIKT QDLEGNKGFQ FMELPMPENL WNDSSIEEYC KNTVATYWHY 480 HGGCLVGKVV DDNYKVIGIK NLRVVDGSTF SDSPGTNPMA TLMMLGRYVG LKVLQQRSS* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2303 | BetA | 3.0e-13 | 385 | 527 | 148 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
TIGR03970 | Rv0697 | 1.0e-31 | 48 | 526 | 526 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
COG2303 | BetA | 8.0e-36 | 43 | 316 | 308 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
PLN02785 | PLN02785 | 1.0e-48 | 380 | 537 | 169 | + Protein HOTHEAD | ||
PLN02785 | PLN02785 | 3.0e-101 | 30 | 337 | 316 | + Protein HOTHEAD |
Gene Ontology | |
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GO Term | Description |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC61982.1 | 0 | 26 | 538 | 33 | 546 | (R)-(+)-mandelonitrile lyase isoform MDL5 precursor [Prunus serotina] |
DDBJ | BAH23313.1 | 0 | 22 | 537 | 27 | 546 | (R)-hydroxynitrile lyase [Prunus mume] |
DDBJ | BAH23314.1 | 0 | 22 | 537 | 27 | 546 | (R)-hydroxynitrile lyase [Prunus mume] |
Swiss-Prot | P52706 | 0 | 26 | 539 | 33 | 546 | MDL1_PRUSE RecName: Full=(R)-mandelonitrile lyase 1; AltName: Full=Hydroxynitrile lyase 1; Short=(R)-oxynitrilase 1; Flags: Precursor |
Swiss-Prot | P52707 | 0 | 26 | 539 | 33 | 547 | MDL3_PRUSE RecName: Full=(R)-mandelonitrile lyase 3; AltName: Full=Hydroxynitrile lyase 3; Short=(R)-oxynitrilase 3; Flags: Precursor |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3red_L | 0 | 26 | 539 | 6 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_K | 0 | 26 | 539 | 6 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_J | 0 | 26 | 539 | 6 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_I | 0 | 26 | 539 | 6 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |
PDB | 3red_H | 0 | 26 | 539 | 6 | 520 | A Chain A, 3.0 A Structure Of The Prunus Mume Hydroxynitrile Lyase Isozyme-1 |