| Basic Information | |
|---|---|
| Species | Cucumis sativus |
| Cazyme ID | Cucsa.090570.1 |
| Family | CE8 |
| Protein Properties | Length: 232 Molecular Weight: 25647.2 Isoelectric Point: 6.2612 |
| Chromosome | Chromosome/Scaffold: 00894 Start: 1795730 End: 1797179 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 38 | 129 | 3.9e-28 |
| VIVDKSGNGNFQTVQAAIDSVPPNNNHWIKIQINPGVYKEKVTIPLEKPFIYLEGADSSNTVITFDDHQQTDTSATFTSRPPNIIVRGITFE | |||
| CE8 | 128 | 230 | 2.8e-29 |
| FEDCMINVNVASLPQVYQGYITAQSRQSAADPSGFVFKECTIKGSGKALLGRAYGPFSRVIFKDAIMGSVVAPEGWYAWHFKGKEENFMYVEENCTGPGA STS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 232 Download |
| MQVRPPFLLL FTLFNAVVFG FEAVNQARDF VLTIQSVVIV DKSGNGNFQT VQAAIDSVPP 60 NNNHWIKIQI NPGVYKEKVT IPLEKPFIYL EGADSSNTVI TFDDHQQTDT SATFTSRPPN 120 IIVRGITFED CMINVNVASL PQVYQGYITA QSRQSAADPS GFVFKECTIK GSGKALLGRA 180 YGPFSRVIFK DAIMGSVVAP EGWYAWHFKG KEENFMYVEE NCTGPGASTS MR 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02176 | PLN02176 | 3.0e-31 | 128 | 232 | 107 | + putative pectinesterase | ||
| PLN02176 | PLN02176 | 1.0e-35 | 34 | 143 | 110 | + putative pectinesterase | ||
| PLN02773 | PLN02773 | 1.0e-35 | 37 | 232 | 270 | + pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-36 | 37 | 232 | 280 | + pectinesterase family protein | ||
| PLN02497 | PLN02497 | 2.0e-44 | 35 | 232 | 275 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_179755.1 | 1e-34 | 37 | 232 | 50 | 305 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330032.1 | 2e-35 | 4 | 143 | 3 | 141 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002330032.1 | 4e-20 | 128 | 232 | 193 | 292 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002335837.1 | 8e-37 | 4 | 131 | 3 | 133 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515255.1 | 0 | 34 | 232 | 38 | 304 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.0000002 | 33 | 130 | 4 | 105 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1gq8_A | 0.00003 | 126 | 232 | 165 | 278 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.0000008 | 126 | 232 | 161 | 274 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
