Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.095020.1 |
Family | GT47 |
Protein Properties | Length: 525 Molecular Weight: 60214 Isoelectric Point: 9.7161 |
Chromosome | Chromosome/Scaffold: 00919 Start: 1034443 End: 1036018 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 106 | 447 | 0 |
IGKYIYVHNLPKKFNEDLVENCRLPHLKWSEVCRFMWENMGLGPKVQNPKRVLTNKGWFYTNQFALEVIFHQRMKQYKCLTKDSFKAAAIFVPFYAGLDV GPYLWGFNASIRDKGPVELGKWLSHTSEWKSLWGRDHFFIGGRITWDFRRNNENDSDWGSKLMLLPEPKNMTMLTIETGYWNNDYAIPYPTDFHPSSDSQ IIEWQRKVKRQKRPFLFSFIGGPRPTQETSIRGELINQCKASKSCYFLACIPGEKKCGDPVAVINTFLNSVFCLQPPGDSFTRRSIFDAILAGCIPVFFH PGTAYAQYIWHLPKDHKKYSVFIPSKRVKEKEVNVSEVLEGI |
Full Sequence |
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Protein Sequence Length: 525 Download |
KNEVTHLTDD FSNSSSPVSL NPTNDTKPEK EAIVTDSESS SIDQNPEKEA IVKTQTISST 60 NSRPGRRSRK RAVRRRGRSV KTKPSQSHAV QLPKTVPLKT EDPSCIGKYI YVHNLPKKFN 120 EDLVENCRLP HLKWSEVCRF MWENMGLGPK VQNPKRVLTN KGWFYTNQFA LEVIFHQRMK 180 QYKCLTKDSF KAAAIFVPFY AGLDVGPYLW GFNASIRDKG PVELGKWLSH TSEWKSLWGR 240 DHFFIGGRIT WDFRRNNEND SDWGSKLMLL PEPKNMTMLT IETGYWNNDY AIPYPTDFHP 300 SSDSQIIEWQ RKVKRQKRPF LFSFIGGPRP TQETSIRGEL INQCKASKSC YFLACIPGEK 360 KCGDPVAVIN TFLNSVFCLQ PPGDSFTRRS IFDAILAGCI PVFFHPGTAY AQYIWHLPKD 420 HKKYSVFIPS KRVKEKEVNV SEVLEGISSK EVLEMRNQVV KMIPRVVYAD PRSRLESFED 480 AFDIAVKGIL ERVERVRKGI EEGKDPTVDF ADMNMKKFEM LGFI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-64 | 104 | 447 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002300146.1 | 0 | 47 | 523 | 65 | 515 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313430.1 | 0 | 21 | 517 | 28 | 552 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |
RefSeq | XP_002321098.1 | 0 | 89 | 522 | 32 | 467 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518609.1 | 0 | 99 | 522 | 70 | 493 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002532518.1 | 0 | 104 | 524 | 101 | 525 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES802449 | 317 | 206 | 518 | 0 |
DV145943 | 263 | 157 | 415 | 0 |
EY661612 | 257 | 241 | 496 | 0 |
JK793974 | 237 | 182 | 417 | 0 |
JG636298 | 264 | 178 | 440 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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