Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.096380.1 |
Family | GH17 |
Protein Properties | Length: 352 Molecular Weight: 39026.7 Isoelectric Point: 9.2309 |
Chromosome | Chromosome/Scaffold: 00919 Start: 2036859 End: 2037916 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 8 | 326 | 0 |
GVNYGRIADNLPPPESVVTLLKAAKIKNIRIYDADHGVLNAFKGSGIEIVVGLGNEFLKDISVGEDRAMNWIKENVQPFLPDTHIRGIAVGNEILGGADV ELWEVLLPAVKNVYSALYRLQLTSVVQVSSPHSEAVFANSFPPSSCIFREDIVPFMKPLLQFFSFIGSPFFINAYPFLAYKNDPEHIDINYALFKKNKGI FDAKTNLHYDNMFEAQVDAAYAALEKVGYPKMPVIVSETGWASHGDENEAGATMKNARTYNRNLRKKLMKKKGTPFRPKMVVRAYIFALFNENSKPGPTS ERNFGLFKPDGSISYDIGF |
Full Sequence |
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Protein Sequence Length: 352 Download |
VDATWTYGVN YGRIADNLPP PESVVTLLKA AKIKNIRIYD ADHGVLNAFK GSGIEIVVGL 60 GNEFLKDISV GEDRAMNWIK ENVQPFLPDT HIRGIAVGNE ILGGADVELW EVLLPAVKNV 120 YSALYRLQLT SVVQVSSPHS EAVFANSFPP SSCIFREDIV PFMKPLLQFF SFIGSPFFIN 180 AYPFLAYKND PEHIDINYAL FKKNKGIFDA KTNLHYDNMF EAQVDAAYAA LEKVGYPKMP 240 VIVSETGWAS HGDENEAGAT MKNARTYNRN LRKKLMKKKG TPFRPKMVVR AYIFALFNEN 300 SKPGPTSERN FGLFKPDGSI SYDIGFTGLK PSAAGPSSLL SFKVRFFTNS N* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 30 | 317 | 297 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-95 | 8 | 326 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70046.1 | 0 | 4 | 334 | 26 | 356 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36326.1 | 0 | 4 | 334 | 37 | 367 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265779.1 | 0 | 4 | 329 | 27 | 352 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299750.1 | 0 | 6 | 344 | 16 | 353 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 6 | 343 | 7 | 342 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 0 | 8 | 326 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 8 | 326 | 2 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 0 | 8 | 326 | 2 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 8 | 326 | 4 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 8 | 326 | 4 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JK988667 | 286 | 1 | 285 | 0 |
EL455956 | 295 | 4 | 298 | 0 |
DT729331 | 234 | 4 | 236 | 0 |
CO114700 | 260 | 4 | 263 | 0 |
ES912714 | 262 | 6 | 267 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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