Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.101480.1 |
Family | CBM43 |
Protein Properties | Length: 463 Molecular Weight: 51159.2 Isoelectric Point: 7.7932 |
Chromosome | Chromosome/Scaffold: 00927 Start: 754783 End: 756281 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 451 | 1.2e-23 |
WCVLKKNVKVFDNISPQVDYACSLSDCTSLGYGSSCNNLDRRGNISYAFNMYYQMQDQSVEACVFNGSAEIVKNNASVGSC | |||
GH17 | 29 | 348 | 0 |
IGVNWGILSSHPLRPNIVVKLLKDNGIKKVKLFDSDAWTVSSLSGSKIETIIGIPNDQLKKFAKSYDDAKDWVKENVTSHMFEGGVDLRYVSVGNEAFLT AYNGSFVKVTFPAMQNIQKAIDAAGHGKKIKVTTALNADVYESSTNLPSDGEFRPDIYSTMKDIVHFLDRNKAPFMVNIYPFLSLYQNPNFPLDYAFFDG GGKATNDKDKSYTNVFDANYDTLIWSLKKLGVSDMKIIVGEVGWPTDGNKFANVNLAKRFYDGLFKKLASGDGTPMRPKEKFEVYLFGLLDEDMKSVLPG FFERHWGIFQFDGKPKFPMD |
Full Sequence |
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Protein Sequence Length: 463 Download |
MAGVSMVPAV WAAVMTLGAV FSVVEGAGIG VNWGILSSHP LRPNIVVKLL KDNGIKKVKL 60 FDSDAWTVSS LSGSKIETII GIPNDQLKKF AKSYDDAKDW VKENVTSHMF EGGVDLRYVS 120 VGNEAFLTAY NGSFVKVTFP AMQNIQKAID AAGHGKKIKV TTALNADVYE SSTNLPSDGE 180 FRPDIYSTMK DIVHFLDRNK APFMVNIYPF LSLYQNPNFP LDYAFFDGGG KATNDKDKSY 240 TNVFDANYDT LIWSLKKLGV SDMKIIVGEV GWPTDGNKFA NVNLAKRFYD GLFKKLASGD 300 GTPMRPKEKF EVYLFGLLDE DMKSVLPGFF ERHWGIFQFD GKPKFPMDSS GKGNDKMLVA 360 AKGVQYLEKK WCVLKKNVKV FDNISPQVDY ACSLSDCTSL GYGSSCNNLD RRGNISYAFN 420 MYYQMQDQSV EACVFNGSAE IVKNNASVGS CLFPIQIVSA GEX |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-14 | 370 | 439 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-28 | 370 | 453 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-77 | 29 | 348 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN62816.1 | 0 | 10 | 462 | 8 | 459 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_201284.1 | 0 | 1 | 462 | 1 | 460 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002275701.1 | 0 | 10 | 462 | 8 | 459 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310612.1 | 0 | 10 | 462 | 8 | 463 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530257.1 | 0 | 14 | 462 | 15 | 460 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 29 | 348 | 3 | 313 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 3ur8_A | 0 | 29 | 348 | 3 | 313 | A Chain A, Structure Of Glycogenin Truncated At Residue 270 In A Complex With Udp |
PDB | 3ur7_B | 0 | 29 | 348 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 29 | 348 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 29 | 348 | 3 | 313 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |