y
Basic Information | |
---|---|
Species | Cucumis sativus |
Cazyme ID | Cucsa.103660.4 |
Family | GT5 |
Protein Properties | Length: 561 Molecular Weight: 63275.3 Isoelectric Point: 6.6592 |
Chromosome | Chromosome/Scaffold: 00927 Start: 2406779 End: 2418347 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT5 | 77 | 544 | 0 |
HIVHICTEMAPIASFGAVASFVTGLSQALQRKGHLVEVILPKYGSMNLNEVQGLREIEVEYYSYFNGQLHGNKIWTGVVRGIGVTFIQPLYYSSFFNREK AHGYSDDFERFMYFSRASLDYIVKSGKKPDVLHIHNWQTALIGPLFWDIFVQQGLEGSRILFTCHDIYAQSLVQPEKIALCGLDPARLHRPDRLQDSSNT HLANTMKGGIVYSNKVVIMSSTHSKGRIIHSLSHGLETTLNMHKEKLLVAPYGFDSSAWDPQKDKILPENYSADDMKGKAVCKIALQKKLGLAENSSFIT VGCFLSDLSDVDTENLREIVQNATKMGVQFIFMTTGEVTSRHKELESLQVKIEDENVRFINRYDETLSHLIFGGSDIILCYSLHDPILQVPMKAMRYGAA PIAITTNNNNGLRHFPDHDYETTKLAMFINSTFGYLSFSQALDEINNNPSEWNHKVLDAMTKDFSWDA |
Full Sequence |
---|
Protein Sequence Length: 561 Download |
MDGKDQASIC WQLLLRIDSM VLTGMISSEE ASKMRRLVMD HKVSIVDAFT DILQKKDAEV 60 LAELRQFSYR SKKSGFHIVH ICTEMAPIAS FGAVASFVTG LSQALQRKGH LVEVILPKYG 120 SMNLNEVQGL REIEVEYYSY FNGQLHGNKI WTGVVRGIGV TFIQPLYYSS FFNREKAHGY 180 SDDFERFMYF SRASLDYIVK SGKKPDVLHI HNWQTALIGP LFWDIFVQQG LEGSRILFTC 240 HDIYAQSLVQ PEKIALCGLD PARLHRPDRL QDSSNTHLAN TMKGGIVYSN KVVIMSSTHS 300 KGRIIHSLSH GLETTLNMHK EKLLVAPYGF DSSAWDPQKD KILPENYSAD DMKGKAVCKI 360 ALQKKLGLAE NSSFITVGCF LSDLSDVDTE NLREIVQNAT KMGVQFIFMT TGEVTSRHKE 420 LESLQVKIED ENVRFINRYD ETLSHLIFGG SDIILCYSLH DPILQVPMKA MRYGAAPIAI 480 TTNNNNGLRH FPDHDYETTK LAMFINSTFG YLSFSQALDE INNNPSEWNH KVLDAMTKDF 540 SWDAECCDIH ISAYTAINSL * 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0297 | GlgA | 1.0e-58 | 78 | 543 | 484 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 1.0e-83 | 77 | 544 | 483 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-86 | 77 | 544 | 494 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 6.0e-93 | 76 | 543 | 487 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN02939 | PLN02939 | 5.0e-131 | 12 | 544 | 550 | + transferase, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACD13787.1 | 0 | 5 | 560 | 131 | 687 | starch synthase V precursor [Lotus japonicus] |
GenBank | ACD13788.1 | 0 | 4 | 560 | 123 | 677 | starch synthase V precursor [Solanum tuberosum] |
GenBank | ACD13789.1 | 0 | 3 | 560 | 126 | 682 | starch synthase V precursor [Vitis vinifera] |
RefSeq | XP_002310316.1 | 0 | 5 | 560 | 117 | 669 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528907.1 | 0 | 74 | 542 | 205 | 671 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3guh_A | 3e-20 | 77 | 542 | 2 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 2r4u_A | 3e-20 | 77 | 542 | 2 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 2r4t_A | 3e-20 | 77 | 542 | 2 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 2qzs_A | 3e-20 | 77 | 542 | 2 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3cx4_A | 9e-20 | 77 | 542 | 2 | 462 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EL455989 | 316 | 45 | 360 | 0 |
EY766100 | 284 | 89 | 372 | 0 |
HO805493 | 257 | 22 | 278 | 0 |
AM726457 | 167 | 114 | 280 | 0 |
AM726457 | 63 | 56 | 118 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|